RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FAM183AA6NL82 134 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 B9A039 149 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 OVOL3O00110 214 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 PRODHO43272 600 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 GLCEO94923 617 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 GPANK1O95872 356 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 ALPLP05186 524 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 SOD3P08294 240 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 PAX1P15863 534 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 CCNOP22674 350 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 THBS4P35443 961 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 SERPINF1P36955 418 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 HTR5AP47898 357 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 EVX1P49640 407 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 ENTPD1P49961 510 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 UCP2P55851 309 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 SELENOVP59797 346 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 HIST1H3AP68431 136 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 NKX6-1P78426 367 aaPredicted RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 ECH1Q13011 328 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 RAB35Q15286 201 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 SNCBQ16143 134 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 MEP1BQ16820 701 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 CCDC92Q53HC0 331 aaPredicted RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 TEX30Q5JUR7 227 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 ELFN2Q5R3F8 820 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 HIST2H3PS2Q5TEC6 136 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 SLX4IPQ5VYV7 408 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 C12orf73Q69YU5 71 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 VHLLQ6RSH7 139 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 HIST2H3AQ71DI3 136 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 CXXC5Q7LFL8 322 aaKnown RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 SHFQ7M4L6 423 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 CPOQ8IVL8 374 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 OR6K6Q8NGW6 343 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 OR1F12Q8NHA8 337 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 IGFBPL1Q8WX77 278 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 COQ7Q99807 217 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 HDHD2Q9H0R4 259 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 OR51V1Q9H2C8 321 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 RASSF4Q9H2L5 321 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 RIBC2Q9H4K1 309 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 C8orf4Q9NR00 106 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 DLL4Q9NR61 685 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 MRPL22Q9NWU5 206 aaKnown RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 H2AFY2Q9P0M6 372 aaPredicted RBP9.52□□□□□ -0.89
CHD3-216ENST00000573936 CYB5R1Q9UHQ9 305 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 LHFPL6Q9Y693 200 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 LOC100509620A0A075B734 347 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 TVP23AA6NH52 213 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 ZNF593O00488 134 aaPredicted RBP9.51□□□□□ -0.89
CHD3-216ENST00000573936 RER1O15258 196 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 SYNGR3O43761 229 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 CD8AP01732 235 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 GYPBP06028 91 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 INHBBP09529 407 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 OR4A8P0C604 315 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 CLUP10909 449 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 CCL2P13500 99 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 TUBG1P23258 451 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 GSTT1P30711 240 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 GGT2P36268 569 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 SNRPD2P62316 118 aaKnown RBP9.51□□□□□ -0.89
CHD3-216ENST00000573936 EFNB3Q15768 340 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 ADIPOQQ15848 244 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 MOGQ16653 247 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 KLHL12Q53G59 568 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
CHD3-216ENST00000573936 SLC18B1Q6NT16 456 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 GALNT4Q8N4A0 578 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 PACRGLQ8N7B6 248 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 OR51L1Q8NGJ5 315 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 C4orf45Q96LM5 186 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 COG8Q96MW5 612 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 INTS14Q96SY0 518 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 PITX2Q99697 317 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 GSX2Q9BZM3 304 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 MED20Q9H944 212 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 HINT3Q9NQE9 182 aaKnown RBP9.51□□□□□ -0.89
CHD3-216ENST00000573936 TUBG2Q9NRH3 451 aa9.51□□□□□ -0.89
CHD3-216ENST00000573936 ZNF701Q9NV72 531 aaPredicted RBP9.51□□□□□ -0.89
CHD3-216ENST00000573936 GDF2Q9UK05 429 aaPredicted RBP9.51□□□□□ -0.89
CHD3-216ENST00000573936 H3BSA7 217 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 J3QW42 95 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 DLGAP1O14490 977 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 TLX2O43763 284 aaPredicted RBP9.5□□□□□ -0.89
CHD3-216ENST00000573936 ICMTO60725 284 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 ABHD16AO95870 558 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 LCKP06239 509 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 PTH2RP49190 550 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 RGS6P49758 472 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 CDC42P60953 191 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 RPS7P62081 194 aaKnown RBP9.5□□□□□ -0.89
CHD3-216ENST00000573936 EFNB1P98172 346 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 PCK2Q16822 640 aa9.5□□□□□ -0.89
CHD3-216ENST00000573936 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms