RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 PRR18Q8N4B5 295 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 FTMTQ8N4E7 242 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 PHYHIPQ92561 330 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 FAM46BQ96A09 425 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 CCNL2Q96S94 520 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 RANBP3Q9H6Z4 567 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 CA10Q9NS85 328 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 TRBV5-5A0A0J9YX44 114 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 NUDT19A8MXV4 375 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 ACOT7O00154 380 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 NDUFS8O00217 210 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 P2RY10O00398 339 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GSTZ1O43708 216 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 NOS1APO75052 506 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 RAB40ALP0C0E4 278 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 CXCL12P48061 93 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GNG2P59768 71 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 THEM4Q5T1C6 240 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 HACD4Q5VWC8 232 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 LCN10Q6JVE6 187 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 KCTD18Q6PI47 426 aaPredicted RBP7.85□□□□□ -1.15
LINC00558-201ENST00000569422 NHLRC1Q6VVB1 395 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 IDO2Q6ZQW0 420 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 COMMD2Q86X83 199 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 APCDD1LQ8NCL9 501 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GALNT11Q8NCW6 608 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 OR13C3Q8NGS6 347 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 RAB40AQ8WXH6 277 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 FAM3DQ96BQ1 224 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 GINS4Q9BRT9 223 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 METTL7AQ9H8H3 244 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 TMEM138Q9NPI0 162 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 DLL4Q9NR61 685 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 SERINC1Q9NRX5 453 aa7.85□□□□□ -1.15
LINC00558-201ENST00000569422 IGLV1-36A0A0B4J1U3 117 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 RAB19A4D1S5 217 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 PYCARD-AS1I3L0S3 204 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CRTAPO75718 401 aaPredicted RBP7.84□□□□□ -1.15
LINC00558-201ENST00000569422 OR2J2O76002 312 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CD1AP06126 327 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CALCBP10092 127 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 LIPCP11150 499 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 SLC2A1P11166 492 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 MNDAP41218 407 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 EMP2P54851 167 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 BIDP55957 195 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 PSMA6P60900 246 aaKnown RBP7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CCL7P80098 99 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 SCRN3Q0VDG4 424 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CAMK2DQ13557 499 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 RAB11BQ15907 218 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 ANKRD37Q7Z713 158 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 BIVMQ86UB2 503 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF519Q8TB69 540 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 TXN2Q99757 166 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF436Q9C0F3 470 aaPredicted RBP7.84□□□□□ -1.15
LINC00558-201ENST00000569422 RAB33BQ9H082 229 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 EMC7Q9NPA0 242 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 DIABLOQ9NR28 239 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 FARSAQ9Y285 508 aaKnown RBP7.84□□□□□ -1.15
LINC00558-201ENST00000569422 POLR1DQ9Y2S0 133 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 RTTNQ86VV8 2226 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 FREM3P0C091 2139 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 TMEM269A0A1B0GVZ9 245 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 A0A1W2PPL8 197 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 ANKRD20A5PA0PJZ0 165 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 G3V3Y1 287 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 MS4A18H0YCH9 400 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 ALOX12BO75342 701 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CTAG2O75638 210 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 MT-ATP6P00846 226 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CD3DP04234 171 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 MS4A18Q3C1V0 323 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 LGALSLQ3ZCW2 172 aaPredicted RBP7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CREB3L2Q70SY1 520 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CHMP1BQ7LBR1 199 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 TMED4Q7Z7H5 227 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 OR10G3Q8NGC4 313 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 OR51S1Q8NGJ8 323 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 OR4C16Q8NGL9 310 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 OR1J4Q8NGS1 313 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 SPACA5Q96QH8 159 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CDC6Q99741 560 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 PPP4R1LQ9P1A2 415 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 CKLFQ9UBR5 152 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 TMEM131Q92545 1883 aa7.84□□□□□ -1.15
LINC00558-201ENST00000569422 A0A1W2PQ72 361 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 GGT3PA6NGU5 568 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 M0QYG6 137 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CTDSPLO15194 276 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 OR2T1O43869 369 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 GLSO94925 669 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CFIP05156 583 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CD2P06729 351 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 LCN1P31025 176 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CDAP32320 146 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 PRKXP51817 358 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 B3GNTL1Q67FW5 361 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM225Q6GV28 225 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms