RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ACOT7O00154 380 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 PSMD9O00233 223 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 SMAD9O15198 467 aaKnown RBP12.94□□□□□ -0.34
COMMD4-221ENST00000567935 RAMP1O60894 148 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 PDGFAP04085 211 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 PSMD7P51665 324 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 LSM6P62312 80 aaKnown RBP12.94□□□□□ -0.34
COMMD4-221ENST00000567935 PLGLB1Q02325 96 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 SFXN4Q6P4A7 337 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 LRRN1Q6UXK5 716 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 DCXRQ7Z4W1 244 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 SLC22A16Q86VW1 577 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 MEIOBQ8N635 442 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-221ENST00000567935 OR6N1Q8NGY5 312 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 OR2AJ1Q8NGZ0 328 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 DERL3Q96Q80 235 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 OR2M2Q96R28 347 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 OR14A2Q96R54 314 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 AMELYQ99218 206 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 TTTY12Q9BZ98 90 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.94□□□□□ -0.34
COMMD4-221ENST00000567935 ABCB9Q9NP78 766 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 ACKR4Q9NPB9 350 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 ABRACLQ9P1F3 81 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 LRP12Q9Y561 859 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 R4GMQ9 66 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 APCP25054 2843 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 ACTL6AO96019 429 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 QDPRP09417 244 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 H2BFMP0C1H6 154 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 PSKH1P11801 424 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 APEX1P27695 318 aaKnown RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 RPS27P42677 84 aaKnown RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 CLDN20P56880 219 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 ARG2P78540 354 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 WDR38Q5JTN6 314 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 XKRXQ6PP77 449 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF704Q6ZNC4 412 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 LAX1Q8IWV1 398 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 TMEM123Q8N131 208 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 GDPD1Q8N9F7 314 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 OR10D3Q8NH80 312 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 PRR7Q8TB68 274 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 CMTM3Q96MX0 182 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 SRXN1Q9BYN0 137 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 PPIL3Q9H2H8 161 aaKnown RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 MIXL1Q9H2W2 232 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 MOB1AQ9H8S9 216 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 NOX4Q9NPH5 578 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 B3GAT2Q9NPZ5 323 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-221ENST00000567935 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 POLR1DQ9Y2S0 133 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 CACNA1CQ13936 2221 aa12.93□□□□□ -0.34
COMMD4-221ENST00000567935 TRBV5-7A0A0A0MS05 114 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 CXCL13O43927 109 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 CYTIPO60759 359 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 SLC43A1O75387 559 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 MPZL1O95297 269 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 SRMP19623 302 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 EIF1AXP47813 144 aaKnown RBP12.92□□□□□ -0.34
COMMD4-221ENST00000567935 MEOX1P50221 254 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 MMP16P51512 607 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF84P51523 738 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 DEFA1P59665 94 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 DEFA3P59666 94 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 FAM27D1Q5T7N8 215 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 CARD17Q5XLA6 110 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 LRFN4Q6PJG9 635 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 KLHL24Q6TFL4 600 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 IGFL2Q6UWQ7 119 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 Q6ZNX1 250 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 GALNTL5Q7Z4T8 443 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 BTLAQ7Z6A9 289 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 LRRC28Q86X40 367 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-221ENST00000567935 CATSPERDQ86XM0 798 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 C20orf196Q8IYI0 205 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 FAM109AQ8N4B1 249 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 TMEM251Q8N6I4 163 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 OR13C5Q8NGS8 318 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 HSD17B8Q92506 261 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 RGP1Q92546 391 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-221ENST00000567935 MED12Q93074 2177 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 TMEM45BQ96B21 275 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 UCN2Q96RP3 112 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF552Q9H707 407 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-221ENST00000567935 TCF7L1Q9HCS4 588 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 POLE4Q9NR33 117 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 PLA2G3Q9NZ20 509 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 COMMD3Q9UBI1 195 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms