RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 OR51L1Q8NGJ5 315 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 OR1F12Q8NHA8 337 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 TRUB1Q8WWH5 349 aaKnown RBP11.57□□□□□ -0.56
CDH1-204ENST00000562118 PIGTQ969N2 578 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 EME1Q96AY2 570 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 DCLRE1CQ96SD1 692 aaKnown RBP11.57□□□□□ -0.56
CDH1-204ENST00000562118 FOXC2Q99958 501 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 TOR3AQ9H497 397 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 RNF121Q9H920 327 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 FAIMQ9NVQ4 179 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 EDARQ9UNE0 448 aa11.57□□□□□ -0.56
CDH1-204ENST00000562118 IGLV3-9A0A075B6K5 115 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 TMEM129A0AVI4 362 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 SMPD2O60906 423 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 ZNF250P15622 560 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 PEX2P28328 305 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 GSTT1P30711 240 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 APLNRP35414 380 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 SNRPGP62308 76 aaKnown RBP11.56□□□□□ -0.56
CDH1-204ENST00000562118 KRTAP1-3Q8IUG1 177 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 ZNF101Q8IZC7 436 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 MUC15Q8N387 334 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 OR10H5Q8NGA6 315 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 OR8J1Q8NGP2 316 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 TEAD3Q99594 435 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 KCNS3Q9BQ31 491 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 GSX2Q9BZM3 304 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 BCL2L14Q9BZR8 327 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 PLK3Q9H4B4 646 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 RIBC2Q9H4K1 309 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 RERGLQ9H628 205 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 CBLN4Q9NTU7 201 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 TBCCD1Q9NVR7 557 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 PLEK2Q9NYT0 353 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 PLEKHA6Q9Y2H5 1048 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 ITPR3Q14573 2671 aa11.56□□□□□ -0.56
CDH1-204ENST00000562118 TVP23AA6NH52 213 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 H7C417 338 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 M0R129 80 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 GPRIN2O60269 458 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 BAG2O95816 211 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 CCL2P13500 99 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 TUBG1P23258 451 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 DNASE1P24855 282 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 THBS4P35443 961 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 GDI2P50395 445 aaKnown RBP11.55□□□□□ -0.56
CDH1-204ENST00000562118 UCP2P55851 309 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 RPS23P62266 143 aaKnown RBP11.55□□□□□ -0.56
CDH1-204ENST00000562118 ADAM8P78325 824 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 ECH1Q13011 328 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 SNTB2Q13425 540 aaKnown RBP11.55□□□□□ -0.56
CDH1-204ENST00000562118 TMED1Q13445 227 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 RIPK1Q13546 671 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 KEAP1Q14145 624 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 TRIP10Q15642 601 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 DEFB113Q30KQ7 82 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 AGAP6Q5VW22 663 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 TCEANCQ8N8B7 351 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 OR6K6Q8NGW6 343 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 RNF133Q8WVZ7 376 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 MRPL24Q96A35 216 aaKnown RBP11.55□□□□□ -0.56
CDH1-204ENST00000562118 PLEKHA8Q96JA3 519 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 INTS14Q96SY0 518 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 CCL19Q99731 98 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 RNPEPL1Q9HAU8 725 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 TUBG2Q9NRH3 451 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 SMPD3Q9NY59 655 aaPredicted RBP11.55□□□□□ -0.56
CDH1-204ENST00000562118 NKX1-2Q9UD57 310 aaPredicted RBP11.55□□□□□ -0.56
CDH1-204ENST00000562118 SPEF1Q9Y4P9 236 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 ORC6Q9Y5N6 252 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 ATP23Q9Y6H3 246 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 ARID1AO14497 2285 aa11.55□□□□□ -0.56
CDH1-204ENST00000562118 C5orf49A4QMS7 147 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 B9A039 149 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 ZNF593O00488 134 aaPredicted RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 TLX2O43763 284 aaPredicted RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 ZNF823P16415 610 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 SERPINF1P36955 418 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 HTR5AP47898 357 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 FABP6P51161 128 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 CDC42P60953 191 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 APOFQ13790 326 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 TMEM255AQ5JRV8 349 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 MBNL2Q5VZF2 373 aaKnown RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 LPCAT4Q643R3 524 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 KRT80Q6KB66 452 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 RFPL4BQ6ZWI9 263 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 LINC00346Q8IVM7 164 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 GID4Q8IVV7 300 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 ZNF454Q8N9F8 522 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 OTOSQ8NHW6 89 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 ZMYND19Q96E35 227 aaPredicted RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 C4orf45Q96LM5 186 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 DOK1Q99704 481 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 ATF6BQ99941 703 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 C1QTNF5Q9BXJ0 243 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms