RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 OTPQ5XKR4 325 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 RAB12Q6IQ22 244 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 TMEM65Q6PI78 240 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ALKAL2Q6UX46 152 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 TMED4Q7Z7H5 227 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 GPAT4Q86UL3 456 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 C17orf82Q86X59 251 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 ZNF584Q8IVC4 421 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 PDZD9Q8IXQ8 264 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 C12orf45Q8N5I9 185 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 DEFB119Q8N690 84 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 OR6S1Q8NH40 331 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 OR1L3Q8NH93 324 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 DUSP19Q8WTR2 217 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 DVL3Q92997 716 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 SLC25A28Q96A46 364 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 PTX4Q96A99 478 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 SEH1LQ96EE3 360 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 CMKLR1Q99788 373 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 DPYSL5Q9BPU6 564 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 COL25A1Q9BXS0 654 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 OR11A1Q9GZK7 315 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 MFFQ9GZY8 342 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 C1orf198Q9H425 327 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 OR52A1Q9UKL2 312 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 COA3Q9Y2R0 106 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 TMEM269A0A1B0GVZ9 245 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 MFSD2BA6NFX1 497 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 C17orf51A8MQB3 221 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 FADS1O60427 444 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SCO1O75880 301 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SCGNO76038 276 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 AQP8O94778 261 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 ISG15P05161 165 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 NMBP08949 121 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 H2BFMP0C1H6 154 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 NAGAP17050 411 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 IGFBP3P17936 291 aaPredicted RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 RAB6AP20340 208 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 CALCRP30988 508 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 ARRB1P49407 418 aaPredicted RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 OR1D5P58170 312 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SORDQ00796 357 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 TAGLNQ01995 201 aaKnown RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 SPOCK1Q08629 439 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 PMPCAQ10713 525 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 CSRP2Q16527 193 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SCGB2B2Q4G0G5 96 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SFRP5Q5T4F7 317 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 C1orf189Q5VU69 101 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 LPCAT3Q6P1A2 487 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 LRFN4Q6PJG9 635 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 DEGS2Q6QHC5 323 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 KLHL24Q6TFL4 600 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 DCXRQ7Z4W1 244 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SLC51BQ86UW2 128 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SLC38A6Q8IZM9 456 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 BEST3Q8N1M1 668 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SPERTQ8NA61 448 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 STEAP2Q8NFT2 490 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 SLC26A10Q8NG04 563 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 OR10H5Q8NGA6 315 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 DDIT4LQ96D03 193 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 PRRT1Q99946 306 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 GAL3ST1Q99999 423 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 B3GNT4Q9C0J1 378 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 VN1R1Q9GZP7 353 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 MYOZ1Q9NP98 299 aaPredicted RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 COMMD9Q9P000 198 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 CGGBP1Q9UFW8 167 aaPredicted RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 FARSAQ9Y285 508 aaKnown RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 XIRP2A4UGR9 3374 aa6.27□□□□□ -1.41
TDP1-213ENST00000555880 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.41
TDP1-213ENST00000555880 PCNX3Q9H6A9 2034 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 A0A0D9SG52 128 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 LOC105371267A0A1B0GV96 52 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 A0A1W2PR77 199 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ANKUB1A6NFN9 424 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 TMEM200CA6NKL6 621 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 RFPL4AA6NLU0 287 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 METTL12A8MUP2 240 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 RFPL4AL1F8VTS6 287 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 H3BMH7 237 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 M0QYG6 137 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 SDC3O75056 442 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 UBBP0CG47 229 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 CD34P28906 385 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 GNALP38405 381 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 APOBEC1P41238 236 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 SUMO3P55854 103 aaPredicted RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 RPS27AP62979 156 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 UBA52P62987 128 aaKnown RBP6.26□□□□□ -1.41
TDP1-213ENST00000555880 TLE3Q04726 772 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 C17orf67Q0P5P2 114 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 UBXN2BQ14CS0 331 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 ZMYND11Q15326 602 aa6.26□□□□□ -1.41
TDP1-213ENST00000555880 OR7A5Q15622 319 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms