RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ZNF441Q8N8Z8 693 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 SLC22A8Q8TCC7 542 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 RASD2Q96D21 266 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 DCLRE1CQ96SD1 692 aaKnown RBP9.88□□□□□ -0.83
SHMT2-216ENST00000554975 ADOQ96SZ5 270 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 DDOQ99489 341 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 HDHD2Q9H0R4 259 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 TAS2R10Q9NYW0 307 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 SPATA2Q9UM82 520 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 EDARQ9UNE0 448 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 RASD1Q9Y272 281 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 ETV7Q9Y603 341 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 FKBP7Q9Y680 259 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 SHISA3A0PJX4 238 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 SMIM30A4D0T7 59 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 A6NIZ1 184 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 TMEM212A6NML5 194 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 A8MVM7 634 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 FAM171A2A8MVW0 826 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 B4DXG7 233 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 BLOC1S5-TXNDC5H3BN57 136 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 CTDSPLO15194 276 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 SELENOFO60613 162 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 OR6A2O95222 327 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 BGLAPP02818 100 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 P04436 131 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ELK1P19419 428 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ABCD3P28288 659 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 EVI2BP34910 448 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 THBS2P35442 1172 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ACVR1BP36896 505 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 AQP2P41181 271 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 CAV3P56539 151 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 AP3S2P59780 193 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 RAP1BP61224 184 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 RAP1AP62834 184 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 DAZAP2Q15038 168 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-216ENST00000554975 Q5PR19 223 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 LINC01590Q5TEZ4 76 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 SHEQ5VZ18 495 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 B3GLCTQ6Y288 498 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 SEM1Q6ZVN7 128 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 HDDC2Q7Z4H3 204 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF671Q8TAW3 534 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 FAM222BQ8WU58 562 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 DEDD2Q8WXF8 326 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 SLC7A6Q92536 515 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 Q96M85 177 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 INTS14Q96SY0 518 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 WACQ9BTA9 647 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ZCCHC4Q9H5U6 513 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ZDHHC11Q9H8X9 412 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 WDR76Q9H967 626 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 MARCH7Q9H992 704 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 INIPQ9NRY2 104 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 DDX28Q9NUL7 540 aaKnown RBP9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ACOXLQ9NUZ1 547 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 EMC3Q9P0I2 261 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 LAMP5Q9UJQ1 280 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 SIRT4Q9Y6E7 314 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-216ENST00000554975 MED12Q93074 2177 aa9.87□□□□□ -0.83
SHMT2-216ENST00000554975 ABCA1O95477 2261 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 A0A0G2JK05 382 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 FAM172BPA6NC97 362 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 OR6C68A6NDL8 312 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 FAM47E-STBD1D6RA91 191 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 E9PI62 339 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 AIPO00170 330 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF354AO60765 605 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-216ENST00000554975 SERPINI2O75830 405 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 NCR1O76036 304 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 YES1P07947 543 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 ROS1P08922 2347 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 CELA3AP09093 270 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 CALCBP10092 127 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 PSKH1P11801 424 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 PRKCAP17252 672 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 CRABP1P29762 137 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 RAG2P55895 527 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 PPIAP62937 165 aaKnown RBP9.86□□□□□ -0.83
SHMT2-216ENST00000554975 MRPS15P82914 257 aaKnown RBP9.86□□□□□ -0.83
SHMT2-216ENST00000554975 RIPPLY1Q0D2K3 151 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 ALKBH1Q13686 389 aaKnown RBP9.86□□□□□ -0.83
SHMT2-216ENST00000554975 Q499Y3 187 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 C1orf185Q5T7R7 199 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 EEF1A1P5Q5VTE0 462 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 UNQ9370/PRO34162Q6UXP9 181 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 SSX6Q7RTT6 188 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF454Q8N9F8 522 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 NAXEQ8NCW5 288 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 OR4M1Q8NGD0 313 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF417Q8TAU3 575 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 RAB40AQ8WXH6 277 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 TRIM63Q969Q1 353 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 Q96MF0 132 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 DPAGT1Q9H3H5 408 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 NEK6Q9HC98 313 aa9.86□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF275Q9NSD4 429 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-216ENST00000554975 SACM1LQ9NTJ5 587 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms