RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 IQCF1Q8N6M8 205 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 NEU4Q8WWR8 484 aaPredicted RBP8.04□□□□□ -1.12
CHD8-206ENST00000553870 PERPQ96FX8 193 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 FOXN4Q96NZ1 517 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 PKP2Q99959 881 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 CACNG6Q9BXT2 260 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 RAB1BQ9H0U4 201 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 MARCH7Q9H992 704 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 MRPL22Q9NWU5 206 aaKnown RBP8.04□□□□□ -1.12
CHD8-206ENST00000553870 SLCO1C1Q9NYB5 712 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 GDF2Q9UK05 429 aaPredicted RBP8.04□□□□□ -1.12
CHD8-206ENST00000553870 ORC6Q9Y5N6 252 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 LHFPL6Q9Y693 200 aa8.04□□□□□ -1.12
CHD8-206ENST00000553870 USF3Q68DE3 2245 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 RTTNQ86VV8 2226 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 ZAR1LA6NP61 321 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 FAM171A2A8MVW0 826 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 ZNF593O00488 134 aaPredicted RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 RER1O15258 196 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 GPANK1O95872 356 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 IGHV3-13P01766 116 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 LCKP06239 509 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 IGFBP5P24593 272 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 GSTT1P30711 240 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 PYCR1P32322 319 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 LIPAP38571 399 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 CDKN1AP38936 164 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 WNT5AP41221 380 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 HTR5AP47898 357 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 ENTPD1P49961 510 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 NUDT6P53370 316 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 RAD23AP54725 363 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 EFNB1P98172 346 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 MEP1BQ16820 701 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 KRTAP27-1Q3LI81 207 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 Q5PR19 223 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 SLX4IPQ5VYV7 408 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 MBNL2Q5VZF2 373 aaKnown RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 SHFQ7M4L6 423 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 CPOQ8IVL8 374 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 PQLC1Q8N2U9 271 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 ICA1LQ8NDH6 482 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 OR5L1Q8NGL2 311 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 OR9Q1Q8NGQ5 310 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 OR1J1Q8NGS3 322 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 SYNPRQ8TBG9 265 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 STMN2Q93045 179 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 C9orf16Q9BUW7 83 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 MYOZ1Q9NP98 299 aaPredicted RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 TVP23BQ9NYZ1 205 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 USE1Q9NZ43 259 aa8.03□□□□□ -1.12
CHD8-206ENST00000553870 H2AFY2Q9P0M6 372 aaPredicted RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 CGGBP1Q9UFW8 167 aaPredicted RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 TMEFF2Q9UIK5 374 aaPredicted RBP8.03□□□□□ -1.12
CHD8-206ENST00000553870 SAC3D1A6NKF1 404 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 FAM183AA6NL82 134 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 M0R233 179 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 GPRIN2O60269 458 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 MITFO75030 526 aaPredicted RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 ABHD16AO95870 558 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 APOC1P02654 83 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 MT-ND5P03915 603 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 ALPLP05186 524 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 GYPBP06028 91 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 CSF3P09919 207 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 GCH1P30793 250 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 SLC15A1P46059 708 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 ALDH3A2P51648 485 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 KLF3P57682 345 aaPredicted RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 PPP1CBP62140 327 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 C12orf73Q69YU5 71 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 PLBD1Q6P4A8 553 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 CORO6Q6QEF8 472 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 DNM1P46Q6ZS02 220 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 COLCA1Q6ZS62 124 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 CXXC5Q7LFL8 322 aaKnown RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 KRTAP1-3Q8IUG1 177 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 ZNF101Q8IZC7 436 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 ZNF511Q8NB15 262 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 OR51L1Q8NGJ5 315 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 OR6K6Q8NGW6 343 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 ABHD4Q8TB40 342 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 KLF14Q8TD94 323 aaPredicted RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 ZNRF4Q8WWF5 429 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 TRUB1Q8WWH5 349 aaKnown RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 SPTSSAQ969W0 71 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 APOBEC3DQ96AK3 386 aaPredicted RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 OTULINQ96BN8 352 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 MARS2Q96GW9 593 aaKnown RBP8.02□□□□□ -1.13
CHD8-206ENST00000553870 INTS14Q96SY0 518 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 PITX2Q99697 317 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 CIB1Q99828 191 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 ATF6BQ99941 703 aa8.02□□□□□ -1.13
CHD8-206ENST00000553870 TMUB1Q9BVT8 246 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms