RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 HNRNPCP07910 306 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ERCC1P07992 297 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ATF1P18846 271 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 POU3F2P20265 443 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 RAB6AP20340 208 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 MSR1P21757 451 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CD96P40200 585 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 KIR3DL2P43630 455 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CSNK1A1P48729 337 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ZNF84P51523 738 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 GFRA1P56159 465 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CLDN17P56750 224 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CARD18P57730 90 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 OR10A3P58181 314 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 AP3S2P59780 193 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 GABREP78334 506 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 FOXO1Q12778 655 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 TAB1Q15750 504 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 FAM189A2Q15884 450 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ETFDHQ16134 617 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 RIPPLY2Q5TAB7 128 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 BCL2L15Q5TBC7 163 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 GLT8D1Q68CQ7 371 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 LRRTM1Q86UE6 522 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 SNX29P2Q8IUI4 249 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 DRAXINQ8NBI3 349 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 DUSP18Q8NEJ0 188 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 GJC3Q8NFK1 279 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 IL17RDQ8NFM7 739 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 OR13C5Q8NGS8 318 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 OR6N1Q8NGY5 312 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 OR2V1Q8NHB1 315 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ENKURQ8TC29 256 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 TSEN15Q8WW01 171 aaKnown RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 HSD17B8Q92506 261 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 RFT1Q96AA3 541 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 SLAMF6Q96DU3 332 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 S100A16Q96FQ6 103 aaKnown RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 SFXN2Q96NB2 322 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 OR2M2Q96R28 347 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 AMELYQ99218 206 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 TTTY10Q9BZA0 68 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 NELFAQ9H3P2 528 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 TMEM185BQ9H7F4 350 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 RNF122Q9H9V4 155 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 POLE4Q9NR33 117 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 C14orf119Q9NWQ9 140 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 COPZ2Q9P299 210 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 STEAP1Q9UHE8 339 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 OR52A1Q9UKL2 312 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 AK6Q9Y3D8 172 aaKnown RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CEP192Q8TEP8 1941 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ADAMTS9Q9P2N4 1935 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 TECTAO75443 2155 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 A0A0J9YW62 118 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 A0A1W2PPL8 197 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 SMIM30A4D0T7 59 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 OR5H15A6NDH6 313 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 PSMD9O00233 223 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 DVL2O14641 736 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 DHHO43323 396 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 SCGNO76038 276 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 NEURL1O76050 574 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ECDO95905 644 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ACTL6AO96019 429 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 EIF4EP06730 217 aaKnown RBP6.47□□□□□ -1.37
ATXN3-221ENST00000553498 CELA3AP09093 270 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 QDPRP09417 244 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 FTH1P19P0C7X4 201 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 LIPCP11150 499 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ITGA3P26006 1051 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 GDF1P27539 372 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 NBL1P41271 181 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 DNASE1L1P49184 302 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ART1P52961 327 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 HIST1H3AP68431 136 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 MRPS34P82930 218 aaKnown RBP6.47□□□□□ -1.37
ATXN3-221ENST00000553498 FMODQ06828 376 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ECH1Q13011 328 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 CAMK2DQ13557 499 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 DYRK1AQ13627 763 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 OR1C1Q15619 314 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 SLC25A35Q3KQZ1 300 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 HIST2H3PS2Q5TEC6 136 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 B3GNTL1Q67FW5 361 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ABLIM2Q6H8Q1 611 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 OR7E24Q6IFN5 339 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 SLC25A25Q6KCM7 469 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 HIST2H3AQ71DI3 136 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 NRARPQ7Z6K4 114 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 GGNQ86UU5 652 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 C20orf196Q8IYI0 205 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ELMOD2Q8IZ81 293 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 RDH10Q8IZV5 341 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 TMEM123Q8N131 208 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 ZNF433Q8N7K0 673 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-221ENST00000553498 OR2M7Q8NG81 312 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 OR4M1Q8NGD0 313 aa6.47□□□□□ -1.37
ATXN3-221ENST00000553498 OR5M1Q8NGP8 315 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms