RNA–Protein interactions for RNA: ENST00000553238.5

SLC8B1-216, Transcript of solute carrier family 8 member B1, humanhuman

TSL 5

Gene SLC8B1, Length 1,675 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-216ENST00000553238 FBXO17Q96EF6 278 aa12.05□□□□□ -0.48
SLC8B1-216ENST00000553238 C4orf45Q96LM5 186 aa12.05□□□□□ -0.48
SLC8B1-216ENST00000553238 PDCD1LG2Q9BQ51 273 aa12.05□□□□□ -0.48
SLC8B1-216ENST00000553238 ZGRF1Q86YA3 2104 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 INTS1Q8N201 2190 aaKnown RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 MBD3L4A6NDZ8 208 aaPredicted RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 MBD3L3A6NE82 208 aaPredicted RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 MBD3L5A6NJ08 208 aaPredicted RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 RER1O15258 196 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 IGHV3-9P01782 118 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 CST2P09228 141 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 CTSSP25774 331 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 KIR3DL2P43630 455 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 LSAMPQ13449 338 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 C22orf42Q6IC83 251 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 UNQ9370/PRO34162Q6UXP9 181 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 SEM1Q6ZVN7 128 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 SPATC1Q76KD6 591 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 P4HA3Q7Z4N8 544 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 CATSPERDQ86XM0 798 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 IL17RDQ8NFM7 739 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 MBD3L2Q8NHZ7 208 aaPredicted RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 DDX28Q9NUL7 540 aaKnown RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 MALT1Q9UDY8 824 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 FBXL3Q9UKT7 428 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 PMF1-BGLAPU3KQ54 211 aa12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 HELZ2Q9BYK8 2649 aaKnown RBP12.04□□□□□ -0.48
SLC8B1-216ENST00000553238 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 WDR1O75083 606 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 RGS9O75916 674 aaPredicted RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 GABRA1P14867 456 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 B4GALT1P15291 398 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 PTGER4P35408 488 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 MMP16P51512 607 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 FOXG1P55316 489 aaPredicted RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SF3B4Q15427 424 aaKnown RBP eCLIP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 WDR38Q5JTN6 314 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SYT9Q86SS6 491 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 LRRC18Q8N456 261 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SLC22A24Q8N4F4 322 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 FAM57AQ8TBR7 257 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SNRNP40Q96DI7 357 aaKnown RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 KCTD7Q96MP8 289 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 MED18Q9BUE0 208 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SLIRPQ9GZT3 109 aaKnown RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 PPIL3Q9H2H8 161 aaKnown RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 CENPMQ9NSP4 180 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 PRSS50Q9UI38 385 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 POLR1DQ9Y2S0 133 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 FAM215AQ9Y5M1 114 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 R4GMQ9 66 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 GCN1Q92616 2671 aaKnown RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SHISA3A0PJX4 238 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 H2BFMP0C1H6 154 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 CD8BP10966 210 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SERPINB10P48595 397 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 MFGE8Q08431 387 aaPredicted RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 RSPO1Q2MKA7 263 aaPredicted RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 ACSM3Q53FZ2 586 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 CCDC92Q53HC0 331 aaPredicted RBP12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 YIF1BQ5BJH7 314 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 FBXW9Q5XUX1 488 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 OR2A2Q6IF42 318 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 ZNF585AQ6P3V2 769 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SKA3Q8IX90 412 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 ZNF100Q8IYN0 542 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 TEX19Q8NA77 164 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 OR5AK2Q8NH90 309 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SH3GL3Q99963 347 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 WACQ9BTA9 647 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 NIPAL2Q9H841 368 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 FAM206AQ9NX38 181 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 GSTK1Q9Y2Q3 226 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 SPTA1P02549 2419 aa12.03□□□□□ -0.48
SLC8B1-216ENST00000553238 TMEM212A6NML5 194 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 KRT33AO76009 404 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 TOXO94900 526 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 SERPINA3P01011 423 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 IL1AP01583 271 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 OTX1P32242 354 aaPredicted RBP12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 ARF1P84077 181 aaKnown RBP12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 LY6DQ14210 128 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 TFAP2EQ6VUC0 442 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 GCNT2Q8N0V5 402 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 PPP1R14AQ96A00 147 aa12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 NXF2Q9GZY0 626 aaKnown RBP12.02□□□□□ -0.49
SLC8B1-216ENST00000553238 KCNN2Q9H2S1 579 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms