RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 CASRP41180 1078 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 CENPAP49450 140 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PMPCAQ10713 525 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PPP1R1AQ13522 171 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 OR7A5Q15622 319 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PRTGQ2VWP7 1150 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 HFEQ30201 348 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PAN3Q58A45 887 aaKnown RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 OR52W1Q6IF63 320 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 UQCC3Q6UW78 93 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 UNQ6126/PRO20091Q6UXV3 157 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 THADAQ6YHU6 1953 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 TMPPEQ6ZT21 453 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PARGQ86W56 976 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 LYPD6Q86Y78 171 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 WDFY1Q8IWB7 410 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 CCDC36Q8IYA8 594 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ZNF679Q8IYX0 411 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PAQR4Q8N4S7 273 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ACBD4Q8NC06 268 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ADAD2Q8NCV1 583 aaKnown RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 OR4D6Q8NGJ1 314 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ASB12Q8WXK4 309 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 TMEM131Q92545 1883 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ZBTB8AQ96BR9 441 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 CMKLR1Q99788 373 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 MICU1Q9BPX6 476 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 NXF5Q9H1B4 397 aaKnown RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PIGMQ9H3S5 423 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ZNF107Q9UII5 783 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 GMEB2Q9UKD1 530 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PLEKHA6Q9Y2H5 1048 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 KCNK7Q9Y2U2 307 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 IGLV1-36A0A0B4J1U3 117 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ZNF736B4DX44 427 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 C5orf67F2Z3F1 127 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ZNF264O43296 627 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 SLC16A7O60669 478 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ATG12O94817 140 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 UTS2O95399 124 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 RNH1P13489 461 aaKnown RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 HOXB2P14652 356 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 HLA-GP17693 338 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 NTSR1P30989 418 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ZNF117Q03924 483 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 C1orf61Q13536 156 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 SNTB1Q13884 538 aaKnown RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 STK11Q15831 433 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ACKR1Q16570 336 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 VWA2Q5GFL6 755 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 FAM109BQ6ICB4 259 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ACOT7LQ6ZUV0 252 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 NUP54Q7Z3B4 507 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 RNF144BQ7Z419 303 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 CATSPERDQ86XM0 798 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 OR13H1Q8NG92 308 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 NKD1Q969G9 470 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 SLC25A44Q96H78 314 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 GABRG3Q99928 467 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 PDCD10Q9BUL8 212 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 NRSN2Q9GZP1 204 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ADAM19Q9H013 955 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ESRP2Q9H6T0 727 aaKnown RBP4.86□□□□□ -1.63
LIMA1-212ENST00000552491 ASF1BQ9NVP2 202 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 COMMD9Q9P000 198 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 MBD2Q9UBB5 411 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 DHDHQ9UQ10 334 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 LRP12Q9Y561 859 aa4.86□□□□□ -1.63
LIMA1-212ENST00000552491 CFAP54Q96N23 3096 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 A0A0A6YYH2 397 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 TMEM218A2RU14 115 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 C9orf170A2RU37 121 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 RAB19A4D1S5 217 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 CDC14CA4D256 554 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 FAM221BA6H8Z2 402 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 A6NJ64 397 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 OR2AT4A6NND4 320 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 FAM25EA8MYX2 175 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 RAB27BO00194 218 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 SOX1O00570 391 aaPredicted RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 TNFRSF10CO14798 259 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 SRSF10O75494 262 aaKnown RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 CYB5AP00167 134 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 DCNP07585 359 aaKnown RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 MAOBP27338 520 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 RPL35P42766 123 aaKnown RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 EFNA3P52797 238 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 CXADRP78310 365 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 GPM6BQ13491 265 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 CCINQ13939 588 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 ELOCQ15369 112 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 INPP5JQ15735 1006 aaPredicted RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 PLEKHN1Q494U1 663 aaPredicted RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 CCDC157Q569K6 752 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 PAPD4Q6PIY7 484 aaKnown RBP4.85□□□□□ -1.63
LIMA1-212ENST00000552491 Q6ZSR6 202 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 TAF8Q7Z7C8 310 aa4.85□□□□□ -1.63
LIMA1-212ENST00000552491 SLC25A42Q86VD7 318 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms