RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ECH1Q13011 328 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 HSD17B12Q53GQ0 312 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 TMEM244Q5VVB8 128 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 LRRN1Q6UXK5 716 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 ABHD3Q8WU67 409 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 ZNF845Q96IR2 970 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-217ENST00000550483 WDFY2Q96P53 400 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 RBM24Q9BX46 236 aaKnown RBP11.11□□□□□ -0.63
CACNB3-217ENST00000550483 C6orf62Q9GZU0 229 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-217ENST00000550483 RNF167Q9H6Y7 350 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 SP140LQ9H930 580 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 DDX28Q9NUL7 540 aaKnown RBP11.11□□□□□ -0.63
CACNB3-217ENST00000550483 FRRS1LQ9P0K9 344 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 NOTCH2Q04721 2471 aa11.11□□□□□ -0.63
CACNB3-217ENST00000550483 LOC110117498-PIK3R3F6TDL0 507 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 KRT33AO76009 404 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 MPZL1O95297 269 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ITGB2P05107 769 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 CST2P09228 141 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ACHEP22303 614 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 HSD11B1P28845 292 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 CD40LGP29965 261 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 PTGER4P35408 488 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 TGFBR1P36897 503 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 PSMB10P40306 273 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ETV6P41212 452 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 PSMA6P60900 246 aaKnown RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 DBPQ10586 325 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 HNRNPA0Q13151 305 aaKnown RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 TAF13Q15543 124 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 SGCAQ16586 387 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 EIF2S3LQ2VIR3 472 aaKnown RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 RNFT1Q5M7Z0 435 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 SPANXN2Q5MJ10 180 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 OR2A2Q6IF42 318 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 OR7E24Q6IFN5 339 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 CATSPERDQ86XM0 798 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 WDFY1Q8IWB7 410 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 APH1AQ96BI3 265 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 GMPPAQ96IJ6 420 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 MAP6Q96JE9 813 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 AMELYQ99218 206 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 SMURF1Q9HCE7 757 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 AKIP1Q9NQ31 210 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 TMEM38BQ9NVV0 291 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 SPRR3Q9UBC9 169 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ASH2LQ9UBL3 628 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-217ENST00000550483 CAMK2AQ9UQM7 478 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 B3GNT3Q9Y2A9 372 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 LIPGQ9Y5X9 500 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 LHFPL6Q9Y693 200 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 PMF1-BGLAPU3KQ54 211 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 BOD1L1Q8NFC6 3051 aa11.1□□□□□ -0.63
CACNB3-217ENST00000550483 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 TMEM269A0A1B0GVZ9 245 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 TTLL8A6PVC2 850 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 AHRRA9YTQ3 701 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 ZNF587BE7ETH6 402 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 PSMD9O00233 223 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 MAGEB4O15481 346 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 OCM2P0CE71 109 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 ZNF12P17014 697 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 RAB3BP20337 219 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 RPS27P42677 84 aaKnown RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 BMXP51813 675 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 NANOS3P60323 173 aaKnown RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 PPP3R1P63098 170 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 HIST1H3AP68431 136 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 KRTCAP3Q53RY4 240 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 WDR38Q5JTN6 314 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 HIST2H3PS2Q5TEC6 136 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 HIST2H3AQ71DI3 136 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 P4HA3Q7Z4N8 544 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 FGD2Q7Z6J4 655 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 ADGRE4PQ86SQ3 457 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 LINC00346Q8IVM7 164 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 FNDC9Q8TBE3 224 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 SNRNP27Q8WVK2 155 aaKnown RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 ITFG2Q969R8 447 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-217ENST00000550483 NABP1Q96AH0 204 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 FOXN4Q96NZ1 517 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 FOXB1Q99853 325 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 PDCD1LG2Q9BQ51 273 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
CACNB3-217ENST00000550483 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms