RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TGOLN2O43493 480 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 GLAP06280 429 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 MGST1P10620 155 aaKnown RBP11.95□□□□□ -0.5
TNC-212ENST00000542877 RPL18Q07020 188 aaKnown RBP11.95□□□□□ -0.5
TNC-212ENST00000542877 OR8G2PQ6IF36 304 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 CCDC190Q86UF4 302 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 UCN3Q969E3 161 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 GPR173Q9NS66 373 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
TNC-212ENST00000542877 FCGR2CP31995 323 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 OR2AE1Q8NHA4 323 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 BAHD1Q8TBE0 780 aaPredicted RBP11.95□□□□□ -0.5
TNC-212ENST00000542877 S1PR5Q9H228 398 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 NME2P1O60361 137 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 NXPH3O95157 252 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 CD80P33681 288 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 PGFP49763 221 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 USP51Q70EK9 711 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 H2BFWTQ7Z2G1 175 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 USB1Q9BQ65 265 aaKnown RBP11.95□□□□□ -0.5
TNC-212ENST00000542877 EMC6Q9BV81 110 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 JAM3Q9BX67 310 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 SLCO1B1Q9Y6L6 691 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 LAMA4Q16363 1823 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 KLRC4-KLRK1H3BQV0 150 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ENSAO43768 121 aaKnown RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 IL3RAP26951 378 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 RAB1AP62820 205 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 VHLLQ6RSH7 139 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 CALHM3Q86XJ0 350 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 MFSD4AQ8N468 514 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 OR13C5Q8NGS8 318 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 HPSE2Q8WWQ2 592 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 PTDSS2Q9BVG9 487 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 FLVCR2Q9UPI3 526 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 R4GMQ9 66 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 E5RGE8 158 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 UPK1AO00322 258 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ZIC2O95409 532 aaPredicted RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 TPOP07202 933 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 RPL12P30050 165 aaKnown RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 SOX18P35713 384 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 TMEM178AQ8NBL3 297 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 SMIM4Q8WVI0 70 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 APH1AQ96BI3 265 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 UQCC2Q9BRT2 126 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 MED9Q9NWA0 146 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 KCND3Q9UK17 655 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 NSG2Q9Y328 171 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 H7BYZ3 331 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ETHE1O95571 254 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 QDPRP09417 244 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 CYB561P49447 251 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 MMP15P51511 669 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 Q6ZRG5 221 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 CA13Q8N1Q1 262 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 OR51H1Q8NH63 302 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ST8SIA1Q92185 356 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 EDAQ92838 391 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 RTL8AQ9BWD3 113 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 SLC6A17Q9H1V8 727 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 CTSFQ9UBX1 484 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 PRSS44E7EML9 344 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 TSPAN12O95859 305 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 WNT11O96014 354 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 CD3DP04234 171 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 SLC17A1Q14916 467 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 RSPO2Q6UXX9 243 aaPredicted RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 PARP12Q9H0J9 701 aaKnown RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 ZNF385DQ9H6B1 395 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 PRSS37A4D1T9 235 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 NKX6-3A6NJ46 265 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 TRIM77I1YAP6 450 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 FZD6O60353 706 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 METTL15P1P0C7V9 234 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 EDN3P14138 238 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 EPHA2P29317 976 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ELLP55199 621 aaPredicted RBP11.94□□□□□ -0.5
TNC-212ENST00000542877 EDDM3BP56851 147 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 LHFPL2Q6ZUX7 228 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 TMEM30AQ9NV96 361 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 ASH2LQ9UBL3 628 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 TIMM10BQ9Y5J6 103 aa11.94□□□□□ -0.5
TNC-212ENST00000542877 PRR35P0CG20 571 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 EPXP11678 715 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 RPA2P15927 270 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 OR1D5P58170 312 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 UBE2IP63279 158 aaKnown RBP11.93□□□□□ -0.5
TNC-212ENST00000542877 RPS19BP1Q86WX3 136 aaKnown RBP11.93□□□□□ -0.5
TNC-212ENST00000542877 OR51F2Q8NH61 342 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 LINC00615Q96LM1 132 aaPredicted RBP11.93□□□□□ -0.5
TNC-212ENST00000542877 TXNIPQ9H3M7 391 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 CDCP1Q9H5V8 836 aa11.93□□□□□ -0.5
TNC-212ENST00000542877 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms