RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 OSGIN1Q9UJX0 560 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 AP3M1Q9Y2T2 418 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 DOPEY1Q5JWR5 2465 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 SPTBN1Q01082 2364 aaKnown RBP4.71□□□□□ -1.66
CPSF7-220ENST00000541963 KIAA1549Q9HCM3 1950 aa4.71□□□□□ -1.66
CPSF7-220ENST00000541963 HEATR5AQ86XA9 2040 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 FLNCQ14315 2725 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 INTS1Q8N201 2190 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 IGHV3-15A0A0B4J1V0 119 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 TMEM72A0PK05 275 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 H0YJX3 145 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 HS3ST1O14792 307 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 OR2T1O43869 369 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 MITFO75030 526 aaPredicted RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 MRPL33O75394 65 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 VAMP5O95183 116 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 AHSA1O95433 338 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 IFNA14P01570 189 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 FGF2P09038 288 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 GKN3PP0CG01 181 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 PNMTP11086 282 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 TNFRSF1BP20333 461 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 PSMB1P20618 241 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 IL32P24001 234 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 GTF2E2P29084 291 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 ACAA2P42765 397 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 RCN1Q15293 331 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 MAPK11Q15759 364 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 HIST2H2BDQ6DRA6 164 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 TMEM225Q6GV28 225 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 ERICH5Q6P6B1 374 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 ULK3Q6PHR2 472 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 DHRS4L2Q6PKH6 230 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 DLEU7Q6UYE1 221 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 LINC00299Q6ZSB3 139 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 KRT74Q7RTS7 529 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 NUFIP2Q7Z417 695 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 RANBP3LQ86VV4 465 aaPredicted RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 CDC20BQ86Y33 519 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 UBE2J2Q8N2K1 259 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 CLIP4Q8N3C7 705 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 POMGNT2Q8NAT1 580 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 OR52E4Q8NGH9 312 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 FNDC8Q8TC99 324 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 ABHD3Q8WU67 409 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 HSD17B8Q92506 261 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 MAL2Q969L2 176 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 LRRC58Q96CX6 371 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 MUCL1Q96DR8 90 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 SLC47A1Q96FL8 570 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 NSL1Q96IY1 281 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 WFIKKN1Q96NZ8 548 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 PSD2Q9BQI7 771 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 ZNF385DQ9H6B1 395 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 COQ10BQ9H8M1 238 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 PLGRKTQ9HBL7 147 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 FAIMQ9NVQ4 179 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 UBAP1Q9NZ09 502 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 NOSIPQ9Y314 301 aaKnown RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 USP9XQ93008 2570 aaPredicted RBP4.7□□□□□ -1.66
CPSF7-220ENST00000541963 NBPF19A0A087WUL8 3843 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 MED12Q93074 2177 aa4.7□□□□□ -1.66
CPSF7-220ENST00000541963 IGKV3D-15A0A087WSY6 115 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 LOC100653049A0A140TA62 436 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 hDV102S1A0JD36 115 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CIB4A0PJX0 185 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 SH3PXD2BA1X283 911 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 OR6C65A6NJZ3 312 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 M0QX08 132 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 MRASO14807 208 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 TIMM23O14925 209 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 SMAD9O15198 467 aaKnown RBP4.69□□□□□ -1.66
CPSF7-220ENST00000541963 SPINT2O43291 252 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 BCAS1O75363 584 aaPredicted RBP4.69□□□□□ -1.66
CPSF7-220ENST00000541963 KRT33AO76009 404 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 KRT34O76011 436 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 MFN2O95140 757 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CLPTM1O96005 669 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 PRSS2P07478 247 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CD1EP15812 388 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CRYGSP22914 178 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 BDKRB2P30411 391 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 IFNA8P32881 189 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 OR3A2P47893 321 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 RGS8P57771 180 aaPredicted RBP4.69□□□□□ -1.66
CPSF7-220ENST00000541963 MTPNP58546 118 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 KRTAP10-9P60411 292 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 ACTR3P61158 418 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 TGFBR3Q03167 851 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CEACAM7Q14002 265 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 KEAP1Q14145 624 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CAPRIN1Q14444 709 aaKnown RBP4.69□□□□□ -1.66
CPSF7-220ENST00000541963 HNF4GQ14541 408 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 OR7A5Q15622 319 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 CTF1Q16619 201 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 BEX5Q5H9J7 111 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 OTUD3Q5T2D3 398 aaPredicted RBP4.69□□□□□ -1.66
CPSF7-220ENST00000541963 C1orf140Q5VVS0 124 aa4.69□□□□□ -1.66
CPSF7-220ENST00000541963 FBXW9Q5XUX1 488 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms