RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 LOC107986453A0A1B0GWG9 222 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 A0A1W2PP11 408 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 C5orf51A6NDU8 294 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 MSGN1A6NI15 193 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 SULT2B1O00204 365 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 AGPAT2O15120 278 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 PMS2P2O95744 297 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC2A1P11166 492 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 HNRNPA2B1P22626 353 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 ID4P47928 161 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 ARRB1P49407 418 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 FNDC7Q5VTL7 733 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 FAM166AQ6J272 317 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 MOB3CQ70IA8 216 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 OOSP2Q86WS3 158 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 FOXRED2Q8IWF2 684 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 C19orf47Q8N9M1 422 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 MAFIPQ8WZ33 124 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 LRFN5Q96NI6 719 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR2S2Q9NQN1 319 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 TAS2R8Q9NYW2 309 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 DHCR7Q9UBM7 475 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 SULT1C2O00338 296 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ADAP1O75689 374 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ERCC1P07992 297 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 GNALP38405 381 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 DNASE1L1P49184 302 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 RASGEF1BQ0VAM2 473 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 SNTB1Q13884 538 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 KCNRGQ8N5I3 272 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR52N4Q8NGI2 321 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 THAP3Q8WTV1 239 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 NUDT22Q9BRQ3 303 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 POTEKPQ9BYX7 375 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC7A5P2Q9GIP4 190 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 TLNRD1Q9H1K6 362 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 PRMT8Q9NR22 394 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 UBQLN4Q9NRR5 601 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 GMEB2Q9UKD1 530 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 MUC3AQ02505 3323 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 BCL2L11O43521 198 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 NDUFA2O43678 99 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 UBBP0CG47 229 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 UBCP0CG48 685 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 CXCR1P25024 350 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 NPBWR1P48145 328 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 NR0B1P51843 470 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 RPS27AP62979 156 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 UBA52P62987 128 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 IL13RA1P78552 427 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ARMC6Q6NXE6 501 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF584Q8IVC4 421 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF679Q8IYX0 411 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR10Z1Q8NGY1 313 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 MARCH1Q8TCQ1 289 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 PTPMT1Q8WUK0 201 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 FGGYQ96C11 551 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 EMC6Q9BV81 110 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 PARP12Q9H0J9 701 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ESRP2Q9H6T0 727 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 CNTD2Q9H8S5 307 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 SOHLH2Q9NX45 425 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 MED29Q9NX70 200 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 COMMD9Q9P000 198 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ABCA7Q8IZY2 2146 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 A0A1B0GTI1 187 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 PRSS37A4D1T9 235 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ACTBP60709 375 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ACTG1P63261 375 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 UNC119Q13432 240 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC9A3R2Q15599 337 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 SHEQ5VZ18 495 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 DCXRQ7Z4W1 244 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR10R2Q8NGX6 335 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 RLN3Q8WXF3 142 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 C8orf44Q96CB5 159 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 FBXO17Q96EF6 278 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 TGM7Q96PF1 710 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF587Q96SQ5 575 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 CMSS1Q9BQ75 279 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 NUDT9Q9BW91 350 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC25A32Q9H2D1 315 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 CSAG2Q9Y5P2 127 aa9.28□□□□□ -0.92
CDC42SE1-207ENST00000540998 IGHV3-20A0A0C4DH32 117 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 OR14I1A6ND48 311 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 EPOPA6NHQ4 379 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 FARS2O95363 451 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 KCNJ3P48549 501 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 PRKXP51817 358 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 EGR3Q06889 387 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 FUT7Q11130 342 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 GFOD2Q3B7J2 385 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 SLC26A10Q8NG04 563 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 RNF128Q8TEB7 428 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 GPN3Q9UHW5 284 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 CLDN4O14493 209 aa9.27□□□□□ -0.93
CDC42SE1-207ENST00000540998 BGLAPP02818 100 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms