RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CES1P1Q9UKY3 287 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 MCTS1Q9ULC4 181 aaKnown RBP4.3□□□□□ -1.72
CLIP1-207ENST00000536634 CFL2Q9Y281 166 aa4.3□□□□□ -1.72
CLIP1-207ENST00000536634 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 A0A0J9YW62 118 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 NDUFS8O00217 210 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 FADS1O60427 444 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 SLU7O95391 586 aaKnown RBP4.29□□□□□ -1.72
CLIP1-207ENST00000536634 KRT14P02533 472 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 ACADSP16219 412 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 COX5AP20674 150 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 IL12BP29460 328 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 RAD52P43351 418 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF83P51522 516 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 PPP5CP53041 499 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 SLMAPQ14BN4 828 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 TRIP10Q15642 601 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF239Q16600 458 aaKnown RBP4.29□□□□□ -1.72
CLIP1-207ENST00000536634 ARMC4Q5T2S8 1044 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 FAM219BQ5XKK7 198 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 APOOLQ6UXV4 268 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 TCAIMQ8N3R3 496 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 SVOPLQ8N434 492 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 NAT8LQ8N9F0 302 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 NUP37Q8NFH4 326 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 OR2V1Q8NHB1 315 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 KCTD4Q8WVF5 259 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 PIK3R3Q92569 461 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 EXT2Q93063 718 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 UBE2E3Q969T4 207 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 DTNBP1Q96EV8 351 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 CERS2Q96G23 380 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 VSTM2LQ96N03 204 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 DESI2Q9BSY9 194 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 DDX47Q9H0S4 455 aaKnown RBP4.29□□□□□ -1.72
CLIP1-207ENST00000536634 WDR41Q9HAD4 459 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 GLRX2Q9NS18 164 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 PRODH2Q9UF12 536 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 DNAH7Q8WXX0 4024 aa4.29□□□□□ -1.72
CLIP1-207ENST00000536634 IGLV3-32A0A0A0MS00 114 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 NPIPA5A0A0B4J1W7 369 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 TRBV4-1A0A0J9YWV2 114 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 LOC390937A0A1W2PQ73 354 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 NPIPA7E9PJI5 369 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 H0YHG0 523 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SNX3O60493 162 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 KRT33AO76009 404 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SYNGR4O95473 234 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 FGGP02679 453 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 KLK1P06870 262 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 TACSTD2P09758 323 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 NPIPA8P0DM63 369 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CD1DP15813 335 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 ACHEP22303 614 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 IGHV1-2P23083 117 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SERPINB1P30740 379 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CASQ1P31415 396 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 MAGEA8P43361 318 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 OR3A2P47893 321 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 TMEM50BP56557 158 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 ZSCAN26Q16670 478 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 GLYR1Q49A26 553 aaPredicted RBP4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SPANXN3Q5MJ09 141 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 TIMM23BQ5SRD1 257 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 HBMQ6B0K9 141 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SULT1C3Q6IMI6 304 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF544Q6NX49 715 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 FRRS1Q6ZNA5 592 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 Q6ZT83 130 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 LRRC70Q7Z2Q7 622 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 MARCH3Q86UD3 253 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 NOA1Q8NC60 698 aaKnown RBP4.28□□□□□ -1.72
CLIP1-207ENST00000536634 MIPOL1Q8TD10 442 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF418Q8TF45 676 aaPredicted RBP4.28□□□□□ -1.72
CLIP1-207ENST00000536634 MRPL24Q96A35 216 aaKnown RBP4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SPSB1Q96BD6 273 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CNRIP1Q96F85 164 aaPredicted RBP4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CFAP36Q96G28 342 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 RADILQ96JH8 1075 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 RNF145Q96MT1 663 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 ZNF681Q96N22 645 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CENPKQ9BS16 269 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 INPP5KQ9BT40 448 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 DERL2Q9GZP9 239 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CAB39LQ9H9S4 337 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 CD274Q9NZQ7 290 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 SLC25A15Q9Y619 301 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 FKBP7Q9Y680 259 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 RYR2Q92736 4967 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
CLIP1-207ENST00000536634 LOC105371242A0A075B767 164 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 IGHV3-15A0A0B4J1V0 119 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 TRAV24A0A0B4J272 114 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 OR5H1A6NKK0 313 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 C9JVG2 144 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ATP6V1G2-DDX39BF2Z307 99 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 H0YIV9 168 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 K7EPI3 171 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 M0R1B8 84 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms