RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 POPDC2Q9HBU9 364 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC25A19Q9HC21 320 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 DNAJC4Q9NNZ3 241 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ABCB9Q9NP78 766 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ISYNA1Q9NPH2 558 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 SLC52A3Q9NQ40 469 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF302Q9NR11 478 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PNO1Q9NRX1 252 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZCCHC3Q9NUD5 404 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 ZNF701Q9NV72 531 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 DDIT4Q9NX09 232 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 MIOSQ9NXC5 875 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TAS2R14Q9NYV8 317 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 GSKIPQ9P0R6 139 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 HSPB7Q9UBY9 170 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TBC1D29Q9UFV1 150 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 IL20RAQ9UHF4 553 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 IL17BQ9UHF5 180 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PSORS1C1Q9UIG5 152 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 FBXL4Q9UKA2 621 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TSPAN16Q9UKR8 245 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 EMCNQ9ULC0 261 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TP53TG3Q9ULZ0 132 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 PSG11Q9UQ72 335 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 EXOGQ9Y2C4 368 aaKnown RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 PRG3Q9Y2Y8 225 aaPredicted RBP2.2□□□□□ -2.06
SKA3-207ENST00000536239 OR51B4Q9Y5P0 310 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 WIF1Q9Y5W5 379 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 COLEC10Q9Y6Z7 277 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 TMEM56-RWDD3S4R434 201 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 COL1A2P08123 1366 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 DOCK5Q9H7D0 1870 aa2.2□□□□□ -2.06
SKA3-207ENST00000536239 DIP2BQ9P265 1576 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 A0A087X002 238 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 A0A096LPI6 279 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TRAV19A0A0A6YYK7 116 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 A0A0D9SG52 128 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 A0A1W2PPE3 182 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 A0A1W2PQL4 384 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 SMCO3A2RU48 225 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 HYKKA2RU49 373 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PI4KAP2A4QPH2 592 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR5H15A6NDH6 313 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PGPEP1LA6NFU8 196 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR5H1A6NKK0 313 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GABRR3A8MPY1 467 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 AGAP14A8MT82 685 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MAGEB17A8MXT2 336 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C9J4A7 227 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 G3V3Q6 166 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GFYI3L273 518 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NME4O00746 187 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SDHDO14521 159 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR7A17O14581 309 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GNGT2O14610 69 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PHOX2AO14813 284 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PPP1R2P9O14990 202 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CYB5BO43169 146 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 EMC8O43402 210 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SSNA1O43805 119 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 DOK2O60496 412 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CDC40O60508 579 aaKnown RBP eCLIP2.19□□□□□ -2.06
SKA3-207ENST00000536239 MTX2O75431 263 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NDUFS3O75489 264 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 DFFBO76075 338 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PROSCO94903 275 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLCO2B1O94956 709 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NDUFB4O95168 129 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 VAMP5O95183 116 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SIX6O95475 246 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 IGHEP01854 428 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PMP2P02689 132 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TFP02787 698 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TCRBP04435 133 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RPN2P04844 631 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ALDOBP05062 364 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 APODP05090 189 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CLEC3BP05452 202 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SNRPCP09234 159 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 UCHL1P09936 223 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR5AC1P0C628 307 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLC35E2BP0CK96 405 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLC35E2P0CK97 266 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 STAG3L2P0CL84 134 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CPN1P15169 458 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 FOSL2P15408 326 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RPA2P15927 270 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 MGMTP16455 207 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ZNF7P17097 686 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 GABRB1P18505 474 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SDC1P18827 310 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GGT1P19440 569 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CXCL3P19876 107 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TYMPP19971 482 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 AZGP1P25311 298 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 PSMA1P25786 263 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 AGTR1P30556 359 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CORO1AP31146 461 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 HOXA13P31271 388 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 TLX1P31314 330 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms