RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 OR2H1Q9GZK4 316 aa8.47□□□□□ -1.05
CSDE1-215ENST00000533818 WNT5BQ9H1J7 359 aa8.47□□□□□ -1.05
CSDE1-215ENST00000533818 MEAF6Q9HAF1 191 aa8.47□□□□□ -1.05
CSDE1-215ENST00000533818 UFSP2Q9NUQ7 469 aa8.47□□□□□ -1.05
CSDE1-215ENST00000533818 TMEM216Q9P0N5 145 aa8.47□□□□□ -1.05
CSDE1-215ENST00000533818 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-215ENST00000533818 STARD10Q9Y365 291 aa8.47□□□□□ -1.05
CSDE1-215ENST00000533818 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
CSDE1-215ENST00000533818 IGKV1D-42A0A075B6H8 117 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 TRAV38-1A0A0B4J264 116 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 H3BQF6 201 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 MLNRO43193 412 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 LY86O95711 162 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 BGLAPP02818 100 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 PGA4P0DJD7 388 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 PGA3P0DJD8 388 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 CDAP32320 146 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 HOXC5Q00444 222 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 SGCAQ16586 387 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 LIN52Q52LA3 116 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 CLEC12AQ5QGZ9 265 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 COLCA1Q6ZS62 124 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 FGFRL1Q8N441 504 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 C10orf53Q8N6V4 93 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 OR4A15Q8NGL6 344 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 OR6S1Q8NH40 331 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 ERGIC1Q969X5 290 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 TEX37Q96LM6 180 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 ZNF582Q96NG8 517 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-215ENST00000533818 KCNK9Q9NPC2 374 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 TRIM36Q9NQ86 728 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 RNF7Q9UBF6 113 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 RPS6KB2Q9UBS0 482 aa8.46□□□□□ -1.06
CSDE1-215ENST00000533818 LYPLA1O75608 230 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-215ENST00000533818 ADORA3P0DMS8 318 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 NR2F1P10589 423 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 RAC2P15153 192 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 PRPS1L1P21108 318 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 MYCNOSP40205 109 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 RAB13P51153 203 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 CLRN1P58418 232 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 MRPS34P82930 218 aaKnown RBP8.45□□□□□ -1.06
CSDE1-215ENST00000533818 MELKQ14680 651 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 C9orf66Q5T8R8 295 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 INTS11Q5TA45 600 aaKnown RBP8.45□□□□□ -1.06
CSDE1-215ENST00000533818 OR2T2Q6IF00 324 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 PIGWQ7Z7B1 504 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 C10orf111Q8N326 155 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 MOGAT1Q96PD6 335 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 ZNF347Q96SE7 839 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 TM2D3Q9BRN9 247 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 DPH5Q9H2P9 285 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 METTL8Q9H825 291 aaKnown RBP8.45□□□□□ -1.06
CSDE1-215ENST00000533818 C12orf10Q9HB07 376 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 MARCOQ9UEW3 520 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-215ENST00000533818 TCF19Q9Y242 345 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 TIMM10BQ9Y5J6 103 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 CAPN7Q9Y6W3 813 aa8.45□□□□□ -1.06
CSDE1-215ENST00000533818 A6NDX4 124 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 OOEPA6NGQ2 149 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 NKX6-3A6NJ46 265 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 LRRN3E7EW58 273 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 OR6A2O95222 327 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 IGHG1P01857 330 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 HLA-DPB1P04440 258 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 ETFAP13804 333 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 CHI3L1P36222 383 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-215ENST00000533818 RAB25P57735 213 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 POU4F2Q12837 409 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 MPPED2Q15777 294 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 PDCD4Q53EL6 469 aaKnown RBP8.44□□□□□ -1.06
CSDE1-215ENST00000533818 PLA1AQ53H76 456 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 NXNQ6DKJ4 435 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 C10orf99Q6UWK7 81 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 HOMEZQ8IX15 550 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 RIMKLAQ8IXN7 391 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 CCDC115Q96NT0 180 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 P2RX4Q99571 388 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 EPYCQ99645 322 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 ECSITQ9BQ95 431 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 TUBB1Q9H4B7 451 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 ZNF443Q9Y2A4 671 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-215ENST00000533818 FIS1Q9Y3D6 152 aa8.44□□□□□ -1.06
CSDE1-215ENST00000533818 SERPINE1P05121 402 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 FPR3P25089 353 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 MRPS25P82663 173 aaKnown RBP8.43□□□□□ -1.06
CSDE1-215ENST00000533818 MAB21L1Q13394 359 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 HIST3H3Q16695 136 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 RABL3Q5HYI8 236 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 CEP85LQ5SZL2 805 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 RNF220Q5VTB9 566 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 PRAMEF6Q5VXH4 476 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 OR4F3Q6IEY1 312 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 FRMD7Q6ZUT3 714 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 FAM90A1Q86YD7 464 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 LRRC34Q8IZ02 419 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 CLDN22Q8N7P3 220 aa8.43□□□□□ -1.06
CSDE1-215ENST00000533818 CELF2-AS1Q8N7Q2 184 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms