RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 FOXN4Q96NZ1 517 aa11.08□□□□□ -0.63
RPUSD4-208ENST00000533628 FUNDC2Q9BWH2 189 aa11.08□□□□□ -0.63
RPUSD4-208ENST00000533628 TOR3AQ9H497 397 aa11.08□□□□□ -0.63
RPUSD4-208ENST00000533628 HINT3Q9NQE9 182 aaKnown RBP11.08□□□□□ -0.63
RPUSD4-208ENST00000533628 TVP23BQ9NYZ1 205 aa11.08□□□□□ -0.63
RPUSD4-208ENST00000533628 CAB39Q9Y376 341 aaPredicted RBP11.08□□□□□ -0.63
RPUSD4-208ENST00000533628 A0A1W2PPL8 197 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 DPRXA6NFQ7 191 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 FAM183AA6NL82 134 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 A6NNC1 897 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 PRKYO43930 277 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 SNAP29O95721 258 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 IGLV1-44P01699 117 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 TFP02787 698 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 PATE4P0C8F1 98 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 CLUP10909 449 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 CBR1P16152 277 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 ZNF3P17036 446 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 PYCR1P32322 319 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 UBE2NP61088 152 aaKnown RBP11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 SGCAQ16586 387 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 ZNF181Q2M3W8 571 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 LINC01590Q5TEZ4 76 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 AGAP6Q5VW22 663 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 CYGBQ8WWM9 190 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 MARVELD3Q96A59 401 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 FBXO17Q96EF6 278 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 C14orf79Q96F83 325 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 C1QTNF6Q9BXI9 259 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 RERGLQ9H628 205 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 MED20Q9H944 212 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
RPUSD4-208ENST00000533628 FAM171A2A8MVW0 826 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 CASKO14936 926 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 WNT11O96014 354 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 IGKV3-15P01624 115 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 HRGP04196 525 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 CST2P09228 141 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 SPI1P17947 270 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 MSR1P21757 451 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 B2MP61769 119 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 MRPS15P82914 257 aaKnown RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 SNAPC1Q16533 368 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 CARTPTQ16568 116 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 C3orf36Q3SXR2 165 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 NCMAPQ5T1S8 102 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 OTPQ5XKR4 325 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 MDP1Q86V88 176 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 DHRSXQ8N5I4 330 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 OR2T4Q8NH00 348 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 HRASLS5Q96KN8 279 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 PITX2Q99697 317 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 TMEM246Q9BRR3 403 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 MRPL22Q9NWU5 206 aaKnown RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 SMPD3Q9NY59 655 aaPredicted RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 PKDREJQ9NTG1 2253 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 M0R129 80 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 UBL3O95164 117 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 GABARAPO95166 117 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 GOSR1O95249 250 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 FARS2O95363 451 aaKnown RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 GYPBP06028 91 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 SLC2A5P22732 501 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 HOXC12P31275 282 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 OR3A3P47888 321 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 ZNF83P51522 516 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 HSF2Q03933 536 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 DGUOKQ16854 277 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 BEX5Q5H9J7 111 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 PLBD1Q6P4A8 553 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 DPPA2Q7Z7J5 298 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 MYPOPQ86VE0 399 aaPredicted RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 CPOQ8IVL8 374 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 LRRC18Q8N456 261 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 RHOXF1Q8NHV9 184 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 SLC38A2Q96QD8 506 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 HS3ST6Q96QI5 342 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 TMEM204Q9BSN7 226 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 ZNF416Q9BWM5 594 aa11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 NDRG4Q9ULP0 352 aaKnown RBP11.07□□□□□ -0.64
RPUSD4-208ENST00000533628 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 H0YAE9 185 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 TRIM77I1YAP6 450 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 CTAG2O75638 210 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 CLIC3O95833 236 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 CELA3BP08861 270 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 PRF1P14222 555 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 ZNF14P17017 642 aaPredicted RBP11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 GGT2P36268 569 aa11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
RPUSD4-208ENST00000533628 RAB1AP62820 205 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms