RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GPR137CQ8N3F9 429 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 C9orf106Q8NAJ2 232 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 OR2G2Q8NGZ5 317 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 MCFD2Q8NI22 146 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 MAP6Q96JE9 813 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 NELFAQ9H3P2 528 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 C1orf198Q9H425 327 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 SIAEQ9HAT2 523 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 GDF2Q9UK05 429 aaPredicted RBP12.68□□□□□ -0.38
TTC39A-216ENST00000530004 CLEC4AQ9UMR7 237 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 POLEQ07864 2286 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
TTC39A-216ENST00000530004 E9PLN8 166 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 MRPL33O75394 65 aaKnown RBP12.67□□□□□ -0.38
TTC39A-216ENST00000530004 SC5DO75845 299 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 TOXO94900 526 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 ZFPL1O95159 310 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 SERPINA3P01011 423 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 MSR1P21757 451 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 GNLYP22749 145 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 TIMP3P35625 211 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 UQCRFS1P47985 274 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 RPS11P62280 158 aaKnown RBP eCLIP12.67□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF404Q494X3 552 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 TUSC5Q8IXB3 177 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 OR2AJ1Q8NGZ0 328 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 SLAMF6Q96DU3 332 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF837Q96EG3 531 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-216ENST00000530004 DACH2Q96NX9 599 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
TTC39A-216ENST00000530004 VKORC1Q9BQB6 163 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 TPK1Q9H3S4 243 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 BCO1Q9HAY6 547 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 CRLF2Q9HC73 371 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 B3GAT2Q9NPZ5 323 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 ASH2LQ9UBL3 628 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF281Q9Y2X9 895 aa12.67□□□□□ -0.38
TTC39A-216ENST00000530004 CASKO14936 926 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 H2BFMP0C1H6 154 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 CLEC2LP0C7M8 214 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 GLI4P10075 376 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 CALRP27797 417 aaKnown RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 OPRL1P41146 370 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 LSM6P62312 80 aaKnown RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 EIF2S3LQ2VIR3 472 aaKnown RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 CFAP77Q6ZQR2 320 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 MCEMP1Q8IX19 187 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 PRSS35Q8N3Z0 413 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 NABP1Q96AH0 204 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 C4orf45Q96LM5 186 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 MED18Q9BUE0 208 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 GP6Q9HCN6 339 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 FBXL3Q9UKT7 428 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 MEMO1Q9Y316 297 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 SHISA3A0PJX4 238 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF724A8MTY0 619 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF254O75437 659 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 RORCP51449 518 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 YIF1BQ5BJH7 314 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 ZMAT1Q5H9K5 638 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 FAM27D1Q5T7N8 215 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 RIPPLY2Q5TAB7 128 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 FDX2Q6P4F2 183 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 LINGO2Q7L985 606 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 OR5AK2Q8NH90 309 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 ZFAND2BQ8WV99 257 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 SLC25A46Q96AG3 418 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 GMPPAQ96IJ6 420 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 NXF2Q9GZY0 626 aaKnown RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
TTC39A-216ENST00000530004 SLCO5A1Q9H2Y9 848 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 MMP27Q9H306 513 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 PARPBPQ9NWS1 579 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 GTF2A1LQ9UNN4 478 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 NBASA2RRP1 2371 aa12.66□□□□□ -0.38
TTC39A-216ENST00000530004 OR4C45A6NMZ5 311 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 PNPP00491 289 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 IL2RAP01589 272 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 YES1P07947 543 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-216ENST00000530004 KIR3DL2P43630 455 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 PER3P56645 1201 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 MFGE8Q08431 387 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-216ENST00000530004 PMPCAQ10713 525 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 HNRNPA0Q13151 305 aaKnown RBP12.65□□□□□ -0.38
TTC39A-216ENST00000530004 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 MOGQ16653 247 aa12.65□□□□□ -0.38
TTC39A-216ENST00000530004 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms