RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PLIN2Q99541 437 aa2.62□□□□□ -1.99
CTR9-204ENST00000529355 SPACA1Q9HBV2 294 aa2.62□□□□□ -1.99
CTR9-204ENST00000529355 FAIMQ9NVQ4 179 aa2.62□□□□□ -1.99
CTR9-204ENST00000529355 STX18Q9P2W9 335 aaKnown RBP2.62□□□□□ -1.99
CTR9-204ENST00000529355 UXTQ9UBK9 157 aaPredicted RBP2.62□□□□□ -1.99
CTR9-204ENST00000529355 CDHR2Q9BYE9 1310 aa2.62□□□□□ -1.99
CTR9-204ENST00000529355 ANKRD36BQ8N2N9 1353 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 CLIP1P30622 1438 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 SMCO2A6NFE2 343 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 AIM2O14862 343 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 DENRO43583 198 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 NDUFA2O43678 99 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 CACNG3O60359 315 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 SURF6O75683 361 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 RBBP9O75884 186 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 MYO1DO94832 1006 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 RHOBTB1O94844 696 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 CLDN9O95484 217 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 KRT75O95678 551 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 BGLAPP02818 100 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 GFAPP14136 432 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 HOXB8P17481 243 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 TCN1P20061 433 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 CD1CP29017 333 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 ATP5C1P36542 298 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 FDFT1P37268 417 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 HSPA9P38646 679 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 TFPI2P48307 235 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 GBX2P52951 348 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 SUB1P53999 127 aaKnown RBP eCLIP2.61□□□□□ -1.99
CTR9-204ENST00000529355 CDH6P55285 790 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 FADDQ13158 208 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 DDX39BQ13838 428 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 PDK3Q15120 406 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 ZNF77Q15935 545 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 THEM4Q5T1C6 240 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 LIN9Q5TKA1 542 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 DNAJC24Q6P3W2 148 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 C19orf35Q6ZS72 473 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 TAS2R42Q7RTR8 314 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 LRRC75A-AS1Q8N1F1 130 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 CCDC12Q8WUD4 166 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 PDCD6IPQ8WUM4 868 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 GEMIN6Q8WXD5 167 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 ZBED3Q96IU2 234 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 PLEKHA8Q96JA3 519 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 BMFQ96LC9 184 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 TRNT1Q96Q11 434 aaKnown RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 CYTH2Q99418 400 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 SORT1Q99523 831 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 SCRT1Q9BWW7 348 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 TMEM59Q9BXS4 323 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 OR51V1Q9H2C8 321 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 ANKRD19PQ9H560 264 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 RANBP3Q9H6Z4 567 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 INIPQ9NRY2 104 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 AGPAT3Q9NRZ7 376 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 RHBDL2Q9NX52 303 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 STMN3Q9NZ72 180 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 ZNF835Q9Y2P0 537 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 MROH7-TTC4A0A0A0MT08 1334 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 MN1Q10571 1320 aaPredicted RBP2.61□□□□□ -1.99
CTR9-204ENST00000529355 UBN2Q6ZU65 1347 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 CPDO75976 1380 aa2.61□□□□□ -1.99
CTR9-204ENST00000529355 KIF21AQ7Z4S6 1674 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 ERCC6Q03468 1493 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 POLR1AO95602 1720 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 ABCA10Q8WWZ4 1543 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PPIAL4EA0A075B759 164 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 A0A1B0GTQ1 180 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 GSTTP1A0A1W2PQM5 241 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 XKRY2A2RUG3 117 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 FAM47DPA6NHR8 397 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 TRPC5OSA6NMA1 111 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 C2orf74A8MZ97 194 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PSMD11O00231 422 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 SLC22A1O15245 554 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 EIF3HO15372 352 aaKnown RBP eCLIP2.6□□□□□ -1.99
CTR9-204ENST00000529355 TRAPPC3O43617 180 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 UPK3AO75631 287 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 SERPINB7O75635 380 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 TSPAN12O95859 305 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 OTCP00480 354 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 GLAP06280 429 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 CT62P0C5K7 136 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PPIAL4FP0DN26 164 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 ATP1B2P14415 290 aaPredicted RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 FOLR1P15328 257 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 RORAP35398 523 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 SPAM1P38567 509 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 OR1G1P47890 313 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 UBE2AP49459 152 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 RORCP51449 518 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 CCNG1P51959 295 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PRRX1P54821 245 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 PSMD4P55036 377 aaKnown RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 RPL10AP62906 217 aaKnown RBP2.6□□□□□ -1.99
CTR9-204ENST00000529355 SLC7A9P82251 487 aa2.6□□□□□ -1.99
CTR9-204ENST00000529355 OGDHQ02218 1023 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms