RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 H3BSA7 217 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ARPC3O15145 178 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 TPD52L2O43399 206 aaKnown RBP8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 OR10H3O60404 316 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 AVPP01185 164 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 TFP02787 698 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 FABP3P05413 133 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 MSMBP08118 114 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 CD55P08174 381 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 HIST1H1CP16403 213 aaKnown RBP8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 HNF1AP20823 631 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 RPS6KA3P51812 740 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ARHGDIAP52565 204 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 SMIM11AP58511 58 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 CDK5R2Q13319 367 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 AQP6Q13520 282 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 MTX3Q5HYI7 312 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 FAM209AQ5JX71 171 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 C1orf94Q6P1W5 598 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 PGBD2Q6P3X8 592 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 LEG1Q6P5S2 330 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 CORO6Q6QEF8 472 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 C16orf89Q6UX73 402 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 CYP2R1Q6VVX0 501 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 RINLQ6ZS11 566 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 C1orf229Q6ZS94 237 aaPredicted RBP8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ADCK1Q86TW2 530 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 GLCCI1Q86VQ1 547 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ZDHHC21Q8IVQ6 265 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 C1orf174Q8IYL3 243 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 OR4K13Q8NH42 304 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 FANK1Q8TC84 345 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 CCL17Q92583 94 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 TMEM186Q96B77 213 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 HAVCR1Q96D42 359 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 CCT8L2Q96SF2 557 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 NMNAT3Q96T66 252 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 DDOQ99489 341 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 NDEL1Q9GZM8 345 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 FN3KQ9H479 309 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ZNF665Q9H7R5 613 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 ELOVL3Q9HB03 270 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 HIF1ANQ9NWT6 349 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 PLEK2Q9NYT0 353 aa8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 PURGQ9UJV8 347 aaKnown RBP8.84□□□□□ -0.99
PRPF40B-204ENST00000527253 TCRBV5S2A0A599 114 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 PLSCR5A0PG75 271 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 OR6C68A6NDL8 312 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 B2RBV5 119 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 PLPP2O43688 288 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 TIMM8AO60220 97 aaPredicted RBP8.83□□□□□ -1
PRPF40B-204ENST00000527253 MT-ND5P03915 603 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 T-ENOLP0DO92 83 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 KITLGP21583 273 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 SLC6A6P31641 620 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 CENPAP49450 140 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 HMGA2P52926 109 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 MS4A2Q01362 244 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 TEKQ02763 1124 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 HLXQ14774 488 aaPredicted RBP8.83□□□□□ -1
PRPF40B-204ENST00000527253 HFEQ30201 348 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 KRTAP27-1Q3LI81 207 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 ZNF362Q5T0B9 420 aaPredicted RBP8.83□□□□□ -1
PRPF40B-204ENST00000527253 ZNF770Q6IQ21 691 aaPredicted RBP8.83□□□□□ -1
PRPF40B-204ENST00000527253 UNQ6126/PRO20091Q6UXV3 157 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
PRPF40B-204ENST00000527253 OR4C15Q8NGM1 316 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 GNPDA2Q8TDQ7 276 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 ZNRF4Q8WWF5 429 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 MCUR1Q96AQ8 359 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 ELMOD3Q96FG2 381 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 IFT27Q9BW83 186 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 EGLN3Q9H6Z9 239 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 KRCC1Q9NPI7 259 aaPredicted RBP8.83□□□□□ -1
PRPF40B-204ENST00000527253 G6PC2Q9NQR9 355 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 CYSLTR2Q9NS75 346 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 VNN3Q9NY84 501 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 ZDHHC8Q9ULC8 765 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 LYVE1Q9Y5Y7 322 aa8.83□□□□□ -1
PRPF40B-204ENST00000527253 DYSFO75923 2080 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 CLDN25C9JDP6 229 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 DCTN3O75935 186 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 GASTP01350 101 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 IGHV2-5P01817 119 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 GSTM3P21266 225 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 ANOS1P23352 680 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 CRABP1P29762 137 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 GGT2P36268 569 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 SRP14P37108 136 aaKnown RBP8.82□□□□□ -1
PRPF40B-204ENST00000527253 LIPAP38571 399 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 MXRA7P84157 204 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 TNFAIP6P98066 277 aaPredicted RBP8.82□□□□□ -1
PRPF40B-204ENST00000527253 COX10Q12887 443 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 PPP1R8Q12972 351 aaKnown RBP8.82□□□□□ -1
PRPF40B-204ENST00000527253 TSPAN31Q12999 210 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 SPATS1Q496A3 300 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 SLC35F1Q5T1Q4 408 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 SLC18B1Q6NT16 456 aa8.82□□□□□ -1
PRPF40B-204ENST00000527253 ACSM5Q6NUN0 579 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms