RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ELMOD3Q96FG2 381 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 C1orf159Q96HA4 380 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 EGLN1Q9GZT9 426 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 RACGAP1Q9H0H5 632 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 LPAR2Q9HBW0 351 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 MSL2Q9HCI7 577 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 SRA1Q9HD15 236 aaKnown RBP15.79■□□□□ 0.12
CAPN1-203ENST00000525013 TBCCD1Q9NVR7 557 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 CACNG2Q9Y698 323 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 DYSFO75923 2080 aa15.79■□□□□ 0.12
CAPN1-203ENST00000525013 CLDN25C9JDP6 229 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 DCTN6O00399 190 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 RER1O15258 196 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 KRT36O76013 467 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 TFP02787 698 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 ATP6V1B2P21281 511 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 SRP14P37108 136 aaKnown RBP15.78■□□□□ 0.12
CAPN1-203ENST00000525013 DVL1P1P54792 670 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-203ENST00000525013 PSG7Q13046 419 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 MEP1BQ16820 701 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 ZMAT1Q5H9K5 638 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 GLCCI1Q86VQ1 547 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 NPEPL1Q8NDH3 523 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 GNPDA2Q8TDQ7 276 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 TMEM158Q8WZ71 300 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 CCL17Q92583 94 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 TIMD4Q96H15 378 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 NMNAT3Q96T66 252 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 POFUT1Q9H488 388 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 ACTR3BQ9P1U1 418 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 CGGBP1Q9UFW8 167 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-203ENST00000525013 B9D1Q9UPM9 204 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 DNHD1Q96M86 4753 aa15.78■□□□□ 0.12
CAPN1-203ENST00000525013 SVEP1Q4LDE5 3571 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 OR6C6A6NF89 314 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 FAM157AC9JC47 383 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 ARPC3O15145 178 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 GAAP10253 952 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 HIST1H1CP16403 213 aaKnown RBP15.77■□□□□ 0.12
CAPN1-203ENST00000525013 PCMT1P22061 227 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 GSSP48637 474 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 TSPAN31Q12999 210 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 KCNMB1Q16558 191 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 CCDC92Q53HC0 331 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-203ENST00000525013 MTX3Q5HYI7 312 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 RINLQ6ZS11 566 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 SPATA3Q8NHX4 192 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 RPRD1BQ9NQG5 326 aaKnown RBP15.77■□□□□ 0.12
CAPN1-203ENST00000525013 ZDHHC8Q9ULC8 765 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 STARD10Q9Y365 291 aa15.77■□□□□ 0.12
CAPN1-203ENST00000525013 TNFRSF11BO00300 401 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 MSMBP08118 114 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 DBHP09172 617 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 TUBG1P23258 451 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 LMO4P61968 165 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 DBPQ10586 325 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-203ENST00000525013 CLEC12AQ5QGZ9 265 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 SLC35F1Q5T1Q4 408 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 PGBD2Q6P3X8 592 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 PGM2L1Q6PCE3 622 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 CORO6Q6QEF8 472 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 OR6V1Q8N148 313 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 CCDC197Q8NCU1 140 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 GJC3Q8NFK1 279 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 RAB1CQ92928 201 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 CMBLQ96DG6 245 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 DIRC2Q96SL1 478 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 TUBG2Q9NRH3 451 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 HIF1ANQ9NWT6 349 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 KLHL21Q9UJP4 597 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 PURGQ9UJV8 347 aaKnown RBP15.76■□□□□ 0.11
CAPN1-203ENST00000525013 LHFPL6Q9Y693 200 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 TANC2Q9HCD6 1990 aa15.76■□□□□ 0.11
CAPN1-203ENST00000525013 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 IDH3BO43837 385 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 FAM107AO95990 144 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 HLA-DQA2P01906 255 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 ADH4P08319 380 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 TNFAIP6P98066 277 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-203ENST00000525013 ZNF620Q6ZNG0 422 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 DHFR2Q86XF0 187 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 ARHGAP24Q8N264 748 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 SDR9C7Q8NEX9 313 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 OR9Q2Q8NGE9 314 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 OR52L1Q8NGH7 329 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 OR51F2Q8NH61 342 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 TMEM186Q96B77 213 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 COG8Q96MW5 612 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 FN3KQ9H479 309 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 EGLN3Q9H6Z9 239 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 ZNF665Q9H7R5 613 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 WIPI2Q9Y4P8 454 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 LYVE1Q9Y5Y7 322 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 ARHGAP32A7KAX9 2087 aa15.75■□□□□ 0.11
CAPN1-203ENST00000525013 OR6C68A6NDL8 312 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 TNFSF4P23510 183 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 THBS2P35442 1172 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 HMGA2P52926 109 aa15.74■□□□□ 0.11
CAPN1-203ENST00000525013 PPP1R8Q12972 351 aaKnown RBP15.74■□□□□ 0.11
CAPN1-203ENST00000525013 ZNF771Q7L3S4 317 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms