RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TFAP2EQ6VUC0 442 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 DPY19L2P2Q6ZN68 376 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 TMPRSS11FQ6ZWK6 438 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 SLC35D2Q76EJ3 337 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 BHLHA15Q7RTS1 189 aaPredicted RBP4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 OLIG3Q7RTU3 272 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 KCTD20Q7Z5Y7 419 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 TSEN54Q7Z6J9 526 aaKnown RBP4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 VTCN1Q7Z7D3 282 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 LAX1Q8IWV1 398 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 NRMQ8IXM6 262 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 DMRTC2Q8IXT2 367 aaPredicted RBP4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 C9orf62Q8N4C0 152 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 PROKR2Q8NFJ6 384 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 OR4M2Q8NGB6 313 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 OR9Q1Q8NGQ5 310 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 OR1J2Q8NGS2 313 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 OR6X1Q8NH79 312 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 LHFPL5Q8TAF8 219 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 TEX47Q8TBZ9 253 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 FANK1Q8TC84 345 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 AP3S1Q92572 193 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 TAAR8Q969N4 342 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 STARD4Q96DR4 205 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 KTI12Q96EK9 354 aaPredicted RBP4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 SLC25A44Q96H78 314 aaPredicted RBP4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 SLC38A2Q96QD8 506 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 CITED4Q96RK1 184 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 FEVQ99581 238 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 MARVELD1Q9BSK0 173 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 ZNF426Q9BUY5 554 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 ALG12Q9BV10 488 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 POLDIP3Q9BY77 421 aaKnown RBP4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 SRXN1Q9BYN0 137 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 UCK2Q9BZX2 261 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 ACTR6Q9GZN1 396 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 NARFLQ9H6Q4 476 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 ISYNA1Q9NPH2 558 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 IMPAD1Q9NX62 359 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 NDUFAF4Q9P032 175 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 JKAMPQ9P055 326 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 GPR160Q9UJ42 338 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 SSR3Q9UNL2 185 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 HIF3AQ9Y2N7 669 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 FLVCR1Q9Y5Y0 555 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 ALG5Q9Y673 324 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 ZGRF1Q86YA3 2104 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 DNAJC13O75165 2243 aa4.99□□□□□ -1.61
CTNNA1-220ENST00000520260 PHF3Q92576 2039 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 IGHV3-15A0A0B4J1V0 119 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 OR5H1A6NKK0 313 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 RIIAD1A6NNX1 92 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ZNF716A6NP11 495 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ZNF814B7Z6K7 855 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 FTCDNL1E5RQL4 147 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 PYCARD-AS1I3L0S3 204 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 PLPP3O14495 311 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 IMPA2O14732 288 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 RGS5O15539 181 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 AKR7A2O43488 359 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 SERPINI2O75830 405 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 TSPAN9O75954 239 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 CRYAAP02489 173 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 BGLAPP02818 100 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 MT-ND5P03915 603 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 CD3EP07766 207 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ADRA2AP08913 450 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 TSPAN19P0C672 248 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ASAH2BP0C7U1 165 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 HSMCR30P0CW71 290 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 PSKH1P11801 424 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ZNF3P17036 446 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 PTAFRP25105 342 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 SDC2P34741 201 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ARR3P36575 388 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 CAPZA2P47755 286 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 NUDT6P53370 316 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 CRYBA2P53672 197 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 CRISP1P54107 249 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 RPL27P61353 136 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 GLO1Q04760 184 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 LGALS3BPQ08380 585 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 TSPAN31Q12999 210 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 MRPL28Q13084 256 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 GUSBP1Q15486 140 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 SPHARQ15513 63 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 MED22Q15528 200 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 OCLNQ16625 522 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 TUSC1Q2TAM9 212 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 C3orf36Q3SXR2 165 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 ZMAT1Q5H9K5 638 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 CLLU1Q5K131 121 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 SLC25A30Q5SVS4 291 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 DDI2Q5TDH0 399 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 VWA1Q6PCB0 445 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 LINC00114Q6XXX2 140 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 C20orf204Q6ZNR8 217 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 NANOGP1Q8N7R0 232 aa4.98□□□□□ -1.61
CTNNA1-220ENST00000520260 TMEM99Q8N816 258 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms