RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CST4P01036 141 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 THBS4P35443 961 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 ARRB1P49407 418 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-208ENST00000519004 FHL1Q13642 323 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 ZNF627Q7L945 461 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 TRAPPC5Q8IUR0 188 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 ZNF615Q8N8J6 731 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 HSD17B11Q8NBQ5 300 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 OR9K2Q8NGE7 335 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 OR56A1Q8NGH5 318 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 FRZBQ92765 325 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 SLC25A36Q96CQ1 311 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 PRAP1Q96NZ9 151 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 NKX3-1Q99801 234 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-208ENST00000519004 ACTR3CQ9C0K3 210 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-208ENST00000519004 SLCO5A1Q9H2Y9 848 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 PPIL1Q9Y3C6 166 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 A0A087WZY1 265 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 A0A1B0GTH9 108 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 A0A1W2PS29 197 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 M0R143 59 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF354AO60765 605 aaPredicted RBP12.21□□□□□ -0.46
PABPC1-208ENST00000519004 UPK3AO75631 287 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 FBXO45P0C2W1 286 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.46
PABPC1-208ENST00000519004 LSSP48449 732 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 PPM1FP49593 454 aaPredicted RBP12.21□□□□□ -0.46
PABPC1-208ENST00000519004 ADAM8P78325 824 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 OR1Q1Q15612 314 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 RAB11BQ15907 218 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 OR9A1PQ8NGU1 263 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 TERB2Q8NHR7 220 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF417Q8TAU3 575 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.46
PABPC1-208ENST00000519004 RELTQ969Z4 430 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 PLD4Q96BZ4 506 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF385AQ96PM9 386 aaKnown RBP12.21□□□□□ -0.46
PABPC1-208ENST00000519004 G6PC3Q9BUM1 346 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.46
PABPC1-208ENST00000519004 B4GALT6Q9UBX8 382 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 CHRNA9Q9UGM1 479 aa12.21□□□□□ -0.46
PABPC1-208ENST00000519004 A0A087WV62 115 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 H3BSH0 61 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 RAB27BO00194 218 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 COCHO43405 550 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 LEFTY1O75610 366 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 ERAL1O75616 437 aaKnown RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 STK17BO94768 372 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 CHATP28329 748 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 SLC6A6P31641 620 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 NPY4RP50391 375 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 MRPS6P82932 125 aaKnown RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 CST9Q5W186 159 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 MED25Q71SY5 747 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 PEG10Q86TG7 708 aaKnown RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 C2orf73Q8N5S3 287 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 OR51A4Q8NGJ6 313 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 PTCHD1Q96NR3 888 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 ZMAT3Q9HA38 289 aaKnown RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 USP36Q9P275 1121 aaKnown RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 IL17BQ9UHF5 180 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 FBXO7Q9Y3I1 522 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 A0A1B0GVT2 93 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 CYB5BO43169 146 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 METTL15P1P0C7V9 234 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 FCARP24071 287 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 AK4P27144 223 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 PRAMEF14Q5SWL7 426 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 OR14K1Q8NGZ2 314 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 SLC41A2Q96JW4 573 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 LMF1Q96S06 567 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 CXXC1Q9P0U4 656 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-208ENST00000519004 MED31Q9Y3C7 131 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 URGCP-MRPS24S4R325 110 aa12.2□□□□□ -0.46
PABPC1-208ENST00000519004 A6NNC1 897 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 C1QTNF3-AMACRE9PGA6 284 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 SLC17A2O00624 439 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 AIFM1O95831 613 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 LMO1P25800 156 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 PRLHRP49683 370 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 RAC1P63000 192 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 SMAD4Q13485 552 aaKnown RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 RAB32Q13637 225 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 LEG1Q6P5S2 330 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 C17orf64Q86WR6 236 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 APOBEC3FQ8IUX4 373 aaKnown RBP12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF584Q8IVC4 421 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF595Q8IYB9 648 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms