RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 KIF2AO00139 706 aaPredicted RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TLR4O00206 839 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 F2RL2O00254 374 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 VCYO14598 125 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ENC1O14682 589 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RGS13O14921 159 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CHUKO15111 745 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NVLO15381 856 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 XRCC3O43542 346 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 XRCC2O43543 280 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NDUFS5O43920 106 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PLIN1O60240 522 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 FZD6O60353 706 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MPZL2O60487 215 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CDC40O60508 579 aaKnown RBP eCLIP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RANBP6O60518 1105 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PDE8AO60658 829 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 VAMP4O75379 141 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PAGE1O75459 146 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RPS6KA5O75582 802 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GRAP2O75791 330 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR2J3O76001 311 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SLC22A5O76082 557 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CST7O76096 145 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HAUS5O94927 633 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 AKR7A3O95154 331 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NDUFB2O95178 105 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SGPL1O95470 568 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HSPA4LO95757 839 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TRUB2O95900 331 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 EPPINO95925 133 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GOT2P00505 430 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 LALBAP00709 142 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PRLP01236 227 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IGHV3-9P01782 118 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TFF1P04155 84 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HLA-DPB1P04440 258 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TYMSP04818 313 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 UGT2B4P06133 528 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ITGAVP06756 1048 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CYP3A4P08684 503 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR2T7P0C7T2 308 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ZDHHC11BP0C7U3 371 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 UBBP0CG47 229 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MPC1LP0DKB6 136 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MYBL2P10244 700 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 KITP10721 976 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PRPS2P11908 318 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 LCP1P13796 627 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 POU2F1P14859 743 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CPA3P15088 417 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MYOGP15173 224 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CHN1P15882 459 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NCK1P16333 377 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GCFC2P16383 781 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ERCC2P18074 760 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RPL35AP18077 110 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 LBPP18428 481 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GABRG2P18507 467 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 EFNA1P20827 205 aaPredicted RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NME2P22392 152 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TUBG1P23258 451 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 VAMP1P23763 118 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HRH2P25021 359 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 U2AF2P26368 475 aaKnown RBP eCLIP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HTR1DP28221 377 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HTR2CP28335 458 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SLC6A1P30531 599 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SLC7A1P30825 629 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SRD5A2P31213 254 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ATICP31939 592 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 STX2P32856 288 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RCVRNP35243 200 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PSMC2P35998 433 aaKnown RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CHI3L1P36222 383 aaPredicted RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 RGS2P41220 211 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 STAT6P42226 847 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PIK3CBP42338 1070 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GYG1P46976 350 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 TGM4P49221 684 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PRLHRP49683 370 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 CCNG1P51959 295 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GTF2A2P52657 109 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PPP5CP53041 499 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ATP1B3P54709 279 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 MFAP2P55001 183 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PLTPP55058 493 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 LIM2P55344 173 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 OR12D2P58182 307 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 YPEL3P61236 119 aaPredicted RBP-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 UBXN2AP68543 259 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 HTD2P86397 168 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 GLO1Q04760 184 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 PJVKQ0ZLH3 352 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 WASHC5Q12768 1159 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 IL24Q13007 206 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 NR1H3Q13133 447 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SLAMF1Q13291 335 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 SGCGQ13326 291 aa-0.93□□□□□ -2.56
SCARNA20.2-201ENST00000516052 ILKQ13418 452 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms