RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 A0A087WV48 116 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 AHRRA9YTQ3 701 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 RER1O15258 196 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 SRSF10O75494 262 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 WISP2O76076 250 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 FARS2O95363 451 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 PNPP00491 289 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 IGHV3-9P01782 118 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 CST2P09228 141 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 UCHL1P09936 223 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 CLEC2LP0C7M8 214 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 B4GALT1P15291 398 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 MAPK3P27361 379 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 S100A5P33763 92 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 MMP16P51512 607 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 PSMA6P60900 246 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 GRB2P62993 217 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 HIST1H3AP68431 136 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 MFGE8Q08431 387 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 SCRN3Q0VDG4 424 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 HNRNPA0Q13151 305 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 MOGQ16653 247 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 NRN1LQ496H8 165 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 Q499Y3 187 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 HSD17B12Q53GQ0 312 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 KRTCAP3Q53RY4 240 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 ELFN2Q5R3F8 820 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 FAM27D1Q5T7N8 215 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 BCL2L15Q5TBC7 163 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 UNQ9370/PRO34162Q6UXP9 181 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 ZNF813Q6ZN06 617 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 ZNF704Q6ZNC4 412 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 HIST2H3AQ71DI3 136 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 NUFIP2Q7Z417 695 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 ABHD12BQ7Z5M8 362 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 ADGRE4PQ86SQ3 457 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 UBE2J2Q8N2K1 259 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 SLC22A24Q8N4F4 322 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 IL17RDQ8NFM7 739 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 OR10S1Q8NGN2 331 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 OR5M9Q8NGP3 310 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 OR6Q1Q8NGQ2 317 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 GPR148Q8TDV2 347 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 SNRNP27Q8WVK2 155 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 RGP1Q92546 391 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 AP3S1Q92572 193 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 FBXO17Q96EF6 278 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 KCNJ15Q99712 375 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 BARHL1Q9BZE3 327 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 C6orf62Q9GZU0 229 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 PPIL3Q9H2H8 161 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 C12orf49Q9H741 205 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 MOB1AQ9H8S9 216 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 PNRC2Q9NPJ4 139 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 ZNF71Q9NQZ8 489 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 DDX28Q9NUL7 540 aaKnown RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 CRNNQ9UBG3 495 aaPredicted RBP6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 OR52A1Q9UKL2 312 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 SLC22A13Q9Y226 551 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 CACNA1GO43497 2377 aa6.72□□□□□ -1.33
SCARNA20.1-201ENST00000516009 A0A075B6Q4 140 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ARPC4-TTLL3A0A0A6YYG9 625 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 TRAV1-2A0A0B4J238 106 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 TRBV5-5A0A0J9YX44 114 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 IQCMA0A1B0GVH7 501 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 A0A1W2PPK0 400 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SHISA3A0PJX4 238 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SMIM30A4D0T7 59 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ACOD1A6NK06 481 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 C1QTNF9BB2RNN3 333 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CLDN25C9JDP6 229 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 RPL36A-HNRNPH2H7BZ11 118 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 TAF4O00268 1085 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ZNHIT1O43257 154 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SS18L1O75177 396 aaPredicted RBP6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 APOC1P02654 83 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ISG15P05161 165 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FAM87AP0C7U9 286 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 C1QTNF9P0C862 333 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 OCM2P0CE71 109 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 UBCP0CG48 685 aaKnown RBP6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 GABRA1P14867 456 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ACHEP22303 614 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CFL1P23528 166 aaKnown RBP6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 OR3A2P47893 321 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 SOX2P48431 317 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CX3CR1P49238 355 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 BMXP51813 675 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PRKXP51817 358 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 CAV3P56539 151 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 PCBD1P61457 104 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ARF1P84077 181 aaKnown RBP6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 FAPQ12884 760 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ECH1Q13011 328 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ZNF846Q147U1 533 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 RAB35Q15286 201 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ODF4Q2M2E3 257 aa6.71□□□□□ -1.34
SCARNA20.1-201ENST00000516009 ACSF3Q4G176 576 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms