RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SPINT2O43291 252 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 TRAPPC6AO75865 159 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 GLSO94925 669 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 TTLL1O95922 423 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SNHG28P0DPA3 235 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SERPINB5P36952 375 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 PRKXP51817 358 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 TCL1AP56279 114 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ERVFRD-1P60508 538 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 KIR2DS1Q14954 304 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 UBE2V2Q15819 145 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 Q75L30 129 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SSX7Q7RTT5 188 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ATG4DQ86TL0 474 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 DTX1Q86Y01 620 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ZNF444Q8N0Y2 327 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 UBL4BQ8N7F7 174 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR4D10Q8NGI6 311 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 RNASE11Q8TAA1 199 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC7A13Q8TCU3 470 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 RASL10AQ92737 203 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ART4Q93070 314 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ZBTB8AQ96BR9 441 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 TCEAL4Q96EI5 215 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 CPNE2Q96FN4 548 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR5B12Q96R08 314 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 TRIM51Q9BSJ1 452 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 CTPS2Q9NRF8 586 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 VAPAQ9P0L0 249 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARL5AQ9Y689 179 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 DHRS7CA6NNS2 312 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 GFYI3L273 518 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 HSD17B6O14756 317 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 GJB5O95377 273 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 PTTG1O95997 202 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 AVPP01185 164 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 LIMS3P0CW19 117 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 LIMS4P0CW20 117 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 CSNK2A2P19784 350 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 XCR1P46094 333 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 VSX2P58304 361 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 RPS14P62263 151 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ESRRGP62508 458 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 C4orf26Q17RF5 130 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 TBC1D28Q2M2D7 210 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SNAI3Q3KNW1 292 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 FRG2Q64ET8 278 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ZFP1Q6P2D0 407 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 CD200R1LQ6Q8B3 271 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 Q6ZRG5 221 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 GLCCI1Q86VQ1 547 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 CLDN22Q8N7P3 220 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 WDR31Q8NA23 367 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SMIM19Q96E16 107 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 COL21A1Q96P44 957 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARL6Q9H0F7 186 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SPNS1Q9H2V7 528 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 AAMDCQ9H7C9 122 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 FKRPQ9H9S5 495 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 DUSP22Q9NRW4 184 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 VNN3Q9NY84 501 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 KLRF1Q9NZS2 232 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC7A7Q9UM01 511 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 KCNIP3Q9Y2W7 256 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 SMCHD1A6NHR9 2005 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 PLIN4Q96Q06 1357 aa5.43□□□□□ -1.54
TRAPPC11-209ENST00000512476 CA11O75493 328 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 RAB36O95755 333 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 PLAUP00749 431 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ACSM4P0C7M7 580 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ATP6V1B2P21281 511 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMEM184AQ6ZMB5 413 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 PEG10Q86TG7 708 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC47A2Q86VL8 602 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 RIMKLAQ8IXN7 391 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ATP6V0D2Q8N8Y2 350 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 GPR151Q8TDV0 419 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 UBE2E3Q969T4 207 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SARAFQ96BY9 339 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 TLNRD1Q9H1K6 362 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 WFDC1Q9HC57 220 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 BFARQ9NZS9 450 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SAMD4AQ9UPU9 718 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARFGEF1Q9Y6D6 1849 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SIPA1L1O43166 1804 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 RNF212BA8MTL3 300 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC31A1O15431 190 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ENTPD6O75354 484 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 FAM228BP0C875 321 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 TCP1P17987 556 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 AVPR1BP47901 424 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 NOVP48745 357 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 RPS6P62753 249 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 RPL31P62899 125 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 CD300CQ08708 224 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 GAGE2BQ13066 116 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 CCDC6Q16204 474 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMEM176BQ3YBM2 270 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 VWA2Q5GFL6 755 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms