RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SPRNQ5BIV9 151 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 TNFAIP8L3Q5GJ75 292 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 DCAF12L2Q5VW00 463 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 FAM91A1Q658Y4 838 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 TMEM154Q6P9G4 183 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 ULK3Q6PHR2 472 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 MSANTD1Q6ZTZ1 278 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 NET1Q7Z628 596 aaPredicted RBP5.61□□□□□ -1.51
COPS4-209ENST00000511653 PXKQ7Z7A4 578 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 KRT73Q86Y46 540 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 KIRREL3Q8IZU9 778 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 BPIFB2Q8N4F0 458 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 C10orf53Q8N6V4 93 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 ICA1LQ8NDH6 482 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 OR4K5Q8NGD3 323 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 OR6S1Q8NH40 331 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 SYNPRQ8TBG9 265 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 TMEM54Q969K7 222 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 RAB39BQ96DA2 213 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 SLC47A1Q96FL8 570 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 C1orf147Q96MC9 270 aaPredicted RBP5.61□□□□□ -1.51
COPS4-209ENST00000511653 CENPHQ9H3R5 247 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 DENND2DQ9H6A0 471 aaPredicted RBP5.61□□□□□ -1.51
COPS4-209ENST00000511653 RMND5AQ9H871 391 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 KCNK9Q9NPC2 374 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 SLC52A3Q9NQ40 469 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 TMEM38BQ9NVV0 291 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 DCAF16Q9NXF7 216 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 GLTPQ9NZD2 209 aa5.61□□□□□ -1.51
COPS4-209ENST00000511653 V9GYY5 206 aaPredicted RBP5.61□□□□□ -1.51
COPS4-209ENST00000511653 ZSCAN5BA6NJL1 495 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 TRPC5OSA6NMA1 111 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 CLDN25C9JDP6 229 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 ACTL6BO94805 426 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 LYPD3O95274 346 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 THY1P04216 161 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 IL6RP08887 468 aaPredicted RBP5.6□□□□□ -1.51
COPS4-209ENST00000511653 ADORA3P0DMS8 318 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 OR8G3PP0DMU2 310 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 HKR1P10072 659 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 NCALDP61601 193 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 LCN2P80188 198 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 CBX1P83916 185 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 CDK6Q00534 326 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 NPTX1Q15818 432 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 TSTQ16762 297 aaKnown RBP5.6□□□□□ -1.51
COPS4-209ENST00000511653 PCGF3Q3KNV8 242 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 SPATA46Q5T0L3 261 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 GCNT6Q5T4J0 391 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 SLC35D2Q76EJ3 337 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 PIWIL3Q7Z3Z3 882 aaKnown RBP5.6□□□□□ -1.51
COPS4-209ENST00000511653 ZNF101Q8IZC7 436 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 MREGQ8N565 214 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 LRRC17Q8N6Y2 441 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 SIGLECL1Q8N7X8 197 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 OR5J2Q8NH18 312 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 RFKQ969G6 155 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 EPYCQ99645 322 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 TMEM43Q9BTV4 400 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 ZNF747Q9BV97 191 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 SAP30LQ9HAJ7 183 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 CDH20Q9HBT6 801 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 TCF7L2Q9NQB0 619 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 THUMPD1Q9NXG2 353 aaKnown RBP5.6□□□□□ -1.51
COPS4-209ENST00000511653 TAS2R5Q9NYW4 299 aa5.6□□□□□ -1.51
COPS4-209ENST00000511653 TRBV5-3A0A0A0MS03 114 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 FAM90A18PA6NE21 464 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 FAM90A16PA6NEW6 464 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 DNAJC9-AS1A6NH13 148 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 FAM90A5PA8MXJ8 464 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 J3QLI3 93 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 KPNA4O00629 521 aaPredicted RBP5.59□□□□□ -1.51
COPS4-209ENST00000511653 UBDO15205 165 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 MFN2O95140 757 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 SNAP29O95721 258 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 CH25HO95992 272 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 BCL10O95999 233 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 IGHV1-46P01743 117 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 OPN1SWP03999 348 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 MMP7P09237 267 aaPredicted RBP5.59□□□□□ -1.51
COPS4-209ENST00000511653 FAM90A15PP0C7V4 464 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 FAM90A14PP0C7W9 464 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 PGA4P0DJD7 388 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 PGA3P0DJD8 388 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 MPV17P39210 176 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 WNT5AP41221 380 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 RAD52P43351 418 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 DEFA6Q01524 100 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 SCARB2Q14108 478 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 ZNF74Q16587 644 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 PDLIM3Q53GG5 364 aaPredicted RBP5.59□□□□□ -1.51
COPS4-209ENST00000511653 KLF17Q5JT82 389 aaPredicted RBP5.59□□□□□ -1.51
COPS4-209ENST00000511653 PAGE3Q5JUK9 113 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 CEP85LQ5SZL2 805 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 LRIF1Q5T3J3 769 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 HHATQ5VTY9 493 aa5.59□□□□□ -1.51
COPS4-209ENST00000511653 REEP3Q6NUK4 255 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms