RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 C12orf10Q9HB07 376 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 CRLF2Q9HC73 371 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 MRPS30Q9NP92 439 aaKnown RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 ZDHHC4Q9NPG8 344 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 UVRAGQ9P2Y5 699 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 RCL1Q9Y2P8 373 aaKnown RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 CAB39Q9Y376 341 aaPredicted RBP1.93□□□□□ -2.1
CHD1-207ENST00000511628 KCNE3Q9Y6H6 103 aa1.93□□□□□ -2.1
CHD1-207ENST00000511628 IGLV4-69A0A075B6H9 119 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 KCNE1BA0A087WTH5 132 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 GOLGA6L7A0A1B0GV03 622 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LRRIQ4A6NIV6 560 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LYRM9A8MSI8 78 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 H7C1H1 209 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 H7C417 338 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 SIVA1O15304 175 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 RAD51CO43502 376 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 ENTPD5O75356 428 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 FCN3O75636 299 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 RP2O75695 350 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 AQP8O94778 261 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 BCHEP06276 602 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 ATF6P18850 670 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 EIF2S2P20042 333 aaKnown RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 CSNK1A1P48729 337 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LINC00315P59091 139 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 RPS15AP62244 130 aaKnown RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 PRR3P79522 188 aaKnown RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 PTGES3Q15185 160 aaKnown RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 SHHQ15465 462 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 PSMD5Q16401 504 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 PGGHGQ32M88 737 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 XKR4Q5GH76 650 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 UBE2UQ5VVX9 321 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LINC01551Q86U37 167 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 H1FOOQ8IZA3 346 aaPredicted RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 COMMD1Q8N668 190 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 NPWQ8N729 165 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 TTC29Q8NA56 475 aaPredicted RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 NOXO1Q8NFA2 376 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 OR10G2Q8NGC3 310 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 ZNF721Q8TF20 911 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LRRC29Q8WV35 223 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 MRGPRFQ96AM1 343 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 NEURL3Q96EH8 262 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 DYNLL2Q96FJ2 89 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 DNAJC1Q96KC8 554 aaKnown RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 GSDMAQ96QA5 445 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 CTRCQ99895 268 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 SLC25A2Q9BXI2 301 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 SLC17A9Q9BYT1 436 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 ANKRD60Q9BZ19 345 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LINC00597Q9H2U6 94 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 IFI27L2Q9H2X8 130 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 SAV1Q9H4B6 383 aaPredicted RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 RPP21Q9H633 154 aaKnown RBP1.92□□□□□ -2.1
CHD1-207ENST00000511628 NTN4Q9HB63 628 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 WFDC1Q9HC57 220 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 ISYNA1Q9NPH2 558 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 LHX9Q9NQ69 397 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 MTFP1Q9UDX5 166 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 ZNF222Q9UK12 451 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 CARMIL3Q8ND23 1372 aa1.92□□□□□ -2.1
CHD1-207ENST00000511628 GPATCH8Q9UKJ3 1502 aaKnown RBP1.91□□□□□ -2.1
CHD1-207ENST00000511628 A0A1B0GTQ1 180 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 A0A1W2PQ67 120 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 H0YIV9 168 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 BCKDKO14874 412 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 ZBTB5O15062 677 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 RDH16O75452 317 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 IFNW1P05000 195 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 RETP07949 1114 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 CLTAP09496 248 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 UBCP0CG48 685 aaKnown RBP1.91□□□□□ -2.1
CHD1-207ENST00000511628 STAG3L3P0CL85 134 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 GZMAP12544 262 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 RAB3BP20337 219 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 F2RP25116 425 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 U2AF2P26368 475 aaKnown RBP eCLIP1.91□□□□□ -2.12e-6■■■□□ 17.9
CHD1-207ENST00000511628 HMOX2P30519 316 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 KIR3DL2P43630 455 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 OR1G1P47890 313 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 SERPINB8P50452 374 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 MNAT1P51948 309 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 CLDN8P56748 225 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 HERVK_113P61574 105 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 SEMG2Q02383 582 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 SYCNQ0VAF6 134 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 ERCC8Q13216 396 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 ZNF266Q14584 549 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 GINS1Q14691 196 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 C16orf72Q14CZ0 275 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 FAM83EQ2M2I3 478 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 HIKESHIQ53FT3 197 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 PIP5KL1Q5T9C9 394 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 METTL21CQ5VZV1 264 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 TTC23LQ6PF05 361 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 SPESP1Q6UW49 350 aa1.91□□□□□ -2.1
CHD1-207ENST00000511628 NPSR1Q6W5P4 371 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms