RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SLC16A7O60669 478 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 KRT36O76013 467 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SCGB1D2O95969 90 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 CLPTM1O96005 669 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 NGFP01138 241 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SERPINA5P05154 406 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 GYPBP06028 91 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 DBHP09172 617 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 CST2P09228 141 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 OR8G3PP0DMU2 310 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 MSR1P21757 451 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 NR4A1P22736 598 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 IFNA8P32881 189 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ARR3P36575 388 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 GNALP38405 381 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 MPV17P39210 176 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ACTR3P61158 418 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 EFNB3Q15768 340 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 KCNMB1Q16558 191 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ALKBH6Q3KRA9 238 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 FAM27BQ5VT28 67 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 C1orf146Q5VVC0 180 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 TMEM236Q5W0B7 351 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 GPR139Q6DWJ6 353 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF544Q6NX49 715 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SHQ1Q6PI26 577 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 CORO6Q6QEF8 472 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 CD300LDQ6UXZ3 194 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC16A14Q7RTX9 510 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 AMIGO2Q86SJ2 522 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ADCK1Q86TW2 530 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 TGIF2LYQ8IUE0 185 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 LINC00346Q8IVM7 164 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 LRRC75A-AS1Q8N1F1 130 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 MUC15Q8N387 334 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 RFLNBQ8N5W9 214 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC30A7Q8NEW0 376 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 BBS1Q8NFJ9 593 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 OR52E2Q8NGJ4 325 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 OR51L1Q8NGJ5 315 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 PYDC1Q8WXC3 89 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 MAP6Q96JE9 813 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 RADILQ96JH8 1075 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 COX4I2Q96KJ9 171 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 Q96M66 194 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 LRGUKQ96M69 825 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SNX18Q96RF0 628 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 AMELYQ99218 206 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 PKP2Q99959 881 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 IFT27Q9BW83 186 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 TSSK6Q9BXA6 273 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 RACGAP1Q9H0H5 632 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 PLK3Q9H4B4 646 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF442Q9H7R0 627 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SIAEQ9HAT2 523 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 HINT3Q9NQE9 182 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 RPRD1BQ9NQG5 326 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 CBLN4Q9NTU7 201 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 TBC1D23Q9NUY8 699 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 PDP1Q9P0J1 537 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 ASH2LQ9UBL3 628 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 DNAJB9Q9UBS3 223 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 B9D1Q9UPM9 204 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 MGAT4BQ9UQ53 548 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SF3B6Q9Y3B4 125 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 COMMD3-BMI1R4GMX3 469 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 IGHV4-30-2A0A087WSY4 118 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 TVP23AA6NH52 213 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 FAM183AA6NL82 134 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 H7C417 338 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 RER1O15258 196 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 KHDRBS3O75525 346 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SNAP29O95721 258 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 RAB36O95755 333 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 OR4A8P0C604 315 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 NAT1P18440 290 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC2A5P22732 501 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 POLR2IP36954 125 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 FABP6P51161 128 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF84P51523 738 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SMIM11AP58511 58 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 GLO1Q04760 184 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SGCAQ16586 387 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SPATA46Q5T0L3 261 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 THEM4Q5T1C6 240 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 C1QTNF12Q5T7M4 302 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC18B1Q6NT16 456 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 SSX8Q7RTT4 187 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 HDDC2Q7Z4H3 204 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 BCDIN3DQ7Z5W3 292 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 YTHDF3Q7Z739 585 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF525Q8N782 197 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 MAPK1IP1LQ8NDC0 245 aa6.17□□□□□ -1.42
TOPBP1-207ENST00000509162 GIPC3Q8TF64 312 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms