RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KITLGP21583 273 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 RBMXP38159 391 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 ERFP50548 548 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 HILS1P60008 231 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 TNFAIP6P98066 277 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 HSP90B2PQ58FF3 399 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 DCAF12L2Q5VW00 463 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 GPR139Q6DWJ6 353 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 Q6ZR03 302 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 USP43Q70EL4 1123 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 ZER1Q7Z7L7 766 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 ADCK1Q86TW2 530 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 FUZQ9BT04 418 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 PLEK2Q9NYT0 353 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 UBAP1Q9NZ09 502 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 EGFL7Q9UHF1 273 aa10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 PURGQ9UJV8 347 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 COA3Q9Y2R0 106 aaPredicted RBP10.99□□□□□ -0.65
HMGCS1-205ENST00000508319 SOCS2O14508 198 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 SLC16A7O60669 478 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 DIRAS1O95057 198 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 TXNDC12O95881 172 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 SEMG1P04279 462 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 DBHP09172 617 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 TUBG1P23258 451 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 GATA3P23771 443 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 LSM6P62312 80 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 LCN2P80188 198 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 CCDC92Q53HC0 331 aaPredicted RBP10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 GLB1L2Q8IW92 636 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 SIGLEC11Q96RL6 698 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 GPA33Q99795 319 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 NUAK2Q9H093 628 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 RERGLQ9H628 205 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 SPAG4Q9NPE6 437 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 TUBG2Q9NRH3 451 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 DCAF13Q9NV06 445 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 OPN4Q9UHM6 478 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 ATPIF1Q9UII2 106 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 PCDHB10Q9UN67 800 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 STARD10Q9Y365 291 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 IER3IP1Q9Y5U9 82 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 NPTNQ9Y639 398 aa10.98□□□□□ -0.65
HMGCS1-205ENST00000508319 J3QW42 95 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 DCTN6O00399 190 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 RER1O15258 196 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 KHDRBS3O75525 346 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 FSHBP01225 129 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 ZFP36P26651 326 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 CDKN2AP42771 156 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 KCNMB1Q16558 191 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 GLYATQ6IB77 296 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 C1orf94Q6P1W5 598 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 DPY19L2P2Q6ZN68 376 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 PEG10Q86TG7 708 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 ZNF283Q8N7M2 679 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 OR2Z1Q8NG97 314 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 OR52J3Q8NH60 311 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 OR1F12Q8NHA8 337 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 HAVCR1Q96D42 359 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 CMBLQ96DG6 245 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 SAMD8Q96LT4 415 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 TSSK2Q96PF2 358 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 TMEM106BQ9NUM4 274 aa10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 SAMD4AQ9UPU9 718 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 FAM32AQ9Y421 112 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-205ENST00000508319 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 IGLV1-36A0A0B4J1U3 117 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 PPIAL4CA0A0B4J2A2 164 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 UNC119BA6NIH7 251 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 PPIAL4DF5H284 164 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 GPANK1O95872 356 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 TNFRSF1AP19438 455 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 TNFSF4P23510 183 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 PRDX6P30041 224 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 DBPQ10586 325 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 HLXQ14774 488 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 MEP1BQ16820 701 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 SMARCD3Q6STE5 483 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 FBXW12Q6X9E4 464 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 RNF148Q8N7C7 305 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 NANPQ8TBE9 248 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 ST7LQ8TDW4 575 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 ITLN1Q8WWA0 313 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 COG8Q96MW5 612 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 OR2V2Q96R30 315 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 DCLRE1CQ96SD1 692 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 SLC6A7Q99884 636 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 ELAC2Q9BQ52 826 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 C7orf69Q9H7B7 122 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 KRCC1Q9NPI7 259 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 IL19Q9UHD0 177 aa10.96□□□□□ -0.65
HMGCS1-205ENST00000508319 AURKCQ9UQB9 309 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms