RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 ACTL9Q8TC94 416 aa0.34□□□□□ -2.36
CLOCK-207ENST00000508049 DSN1Q9H410 356 aa0.34□□□□□ -2.36
CLOCK-207ENST00000508049 DAZ1Q9NQZ3 744 aaKnown RBP0.34□□□□□ -2.36
CLOCK-207ENST00000508049 NINJ2Q9NZG7 142 aa0.34□□□□□ -2.36
CLOCK-207ENST00000508049 PLXNA3P51805 1871 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 VWA8A3KMH1 1905 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 KRBOX1C9JBD0 128 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 PRRG1O14668 218 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 CTSLP07711 333 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 HLA-DMAP28067 261 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 DUSP3P51452 185 aaPredicted RBP0.33□□□□□ -2.36
CLOCK-207ENST00000508049 P2RX1P51575 399 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 TWF1Q12792 350 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 PIPOXQ9P0Z9 390 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 MOSPD1Q9UJG1 213 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 ST3GAL6Q9Y274 331 aa0.33□□□□□ -2.36
CLOCK-207ENST00000508049 GABRR3A8MPY1 467 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 L7N2F9 121 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 OR7C2O60412 319 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 GLSO94925 669 aaPredicted RBP0.32□□□□□ -2.36
CLOCK-207ENST00000508049 CTSGP08311 255 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 CD37P11049 281 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 F2RP25116 425 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 UBE2E1P51965 193 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 FBXW4P57775 412 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 VSX2P58304 361 aaPredicted RBP0.32□□□□□ -2.36
CLOCK-207ENST00000508049 MXD1Q05195 221 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 SS18Q15532 418 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 ISLR2Q6UXK2 745 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 DHDDSQ86SQ9 333 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.32□□□□□ -2.36
CLOCK-207ENST00000508049 CPNE4Q96A23 557 aaPredicted RBP0.32□□□□□ -2.36
CLOCK-207ENST00000508049 SERPINB12Q96P63 405 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 SLC38A2Q96QD8 506 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 PPA2Q9H2U2 334 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 ZNF442Q9H7R0 627 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 RPRD2Q5VT52 1461 aaKnown RBP0.32□□□□□ -2.36
CLOCK-207ENST00000508049 COL4A1P02462 1669 aa0.32□□□□□ -2.36
CLOCK-207ENST00000508049 NDUFC2-KCTD14E9PQ53 114 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 CHMP2AO43633 222 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 DPM1O60762 260 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 MMP7P09237 267 aaPredicted RBP0.31□□□□□ -2.36
CLOCK-207ENST00000508049 CD28P10747 220 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 GFERP55789 205 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 C2orf54Q08AI8 447 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 SCGB2A2Q13296 93 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 SOHLH1Q5JUK2 328 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 ZNF660Q6AZW8 331 aaPredicted RBP0.31□□□□□ -2.36
CLOCK-207ENST00000508049 HDDC3Q8N4P3 179 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 MFSD9Q8NBP5 474 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 C20orf166-AS1Q96NR2 134 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 HSD3B7Q9H2F3 369 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 ZNF302Q9NR11 478 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 MAPK8IP3Q9UPT6 1336 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 DYSFO75923 2080 aa0.31□□□□□ -2.36
CLOCK-207ENST00000508049 ZNF208O43345 1280 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 SURF6O75683 361 aaKnown RBP0.3□□□□□ -2.36
CLOCK-207ENST00000508049 SEMA3DO95025 777 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 IL5RAQ01344 420 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 ECH1Q13011 328 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 LINC00469Q8N7U9 141 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 COX18Q8N8Q8 333 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 OR4M1Q8NGD0 313 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 OR2V2Q96R30 315 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 NIPAL2Q9H841 368 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 PIN4Q9Y237 131 aaKnown RBP0.3□□□□□ -2.36
CLOCK-207ENST00000508049 PALLDQ8WX93 1383 aa0.3□□□□□ -2.36
CLOCK-207ENST00000508049 DENND4AQ7Z401 1863 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 GOLGA6L4A6NEF3 574 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 DNALI1O14645 258 aaPredicted RBP0.29□□□□□ -2.36
CLOCK-207ENST00000508049 SYNGR2O43760 224 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 CAMLGP49069 296 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 RGS4P49798 205 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 PPT1P50897 306 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 CMC4P56277 68 aaPredicted RBP0.29□□□□□ -2.36
CLOCK-207ENST00000508049 SYNJ2BPP57105 145 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 RPL23P62829 140 aaKnown RBP0.29□□□□□ -2.36
CLOCK-207ENST00000508049 EGFL6Q8IUX8 553 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 DEFB119Q8N690 84 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 ANKFN1Q8N957 763 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 VANGL2Q9ULK5 521 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 STRCP1A6NGW2 1772 aa0.29□□□□□ -2.36
CLOCK-207ENST00000508049 LOXHD1Q8IVV2 1947 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 METTL21EPA6NDL7 271 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 CLDN34H7C241 214 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 RPN2P04844 631 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 CHI3L1P36222 383 aaPredicted RBP0.28□□□□□ -2.36
CLOCK-207ENST00000508049 VHLP40337 213 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 MRPL28Q13084 256 aaKnown RBP0.28□□□□□ -2.36
CLOCK-207ENST00000508049 CHRNA6Q15825 494 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 USH1GQ495M9 461 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 OR4F3Q6IEY1 312 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 NKAIN4Q8IVV8 208 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 RBM14Q96PK6 669 aaKnown RBP0.28□□□□□ -2.36
CLOCK-207ENST00000508049 TMEM237Q96Q45 408 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 PANX2Q96RD6 677 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 SLC7A8Q9UHI5 535 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 U3KQV3 271 aa0.28□□□□□ -2.36
CLOCK-207ENST00000508049 ATP10AO60312 1499 aa0.28□□□□□ -2.37
CLOCK-207ENST00000508049 A0A1B0GUH1 482 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms