RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SEC61A1P61619 476 aaKnown RBP11.09□□□□□ -0.63
DDX41-204ENST00000504807 CDK5R2Q13319 367 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 HLXQ14774 488 aaPredicted RBP11.09□□□□□ -0.63
DDX41-204ENST00000504807 ANKDD1AQ495B1 522 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 HSP90B2PQ58FF3 399 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 CORO6Q6QEF8 472 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
DDX41-204ENST00000504807 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 FNDC8Q8TC99 324 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ZNRF4Q8WWF5 429 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 CCL17Q92583 94 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 SIGLEC11Q96RL6 698 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 FN3KQ9H479 309 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 DECR2Q9NUI1 292 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 ADA2Q9NZK5 511 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 EIF3KQ9UBQ5 218 aaKnown RBP11.09□□□□□ -0.63
DDX41-204ENST00000504807 OPN4Q9UHM6 478 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 PURGQ9UJV8 347 aaKnown RBP11.09□□□□□ -0.63
DDX41-204ENST00000504807 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
DDX41-204ENST00000504807 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 UNC119BA6NIH7 251 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 TPD52L2O43399 206 aaKnown RBP11.08□□□□□ -0.64
DDX41-204ENST00000504807 ABHD16AO95870 558 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 CD55P08174 381 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 COX5BP10606 129 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 NR2C1P13056 603 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 PRDX6P30041 224 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 IFNA8P32881 189 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 HIST1H3AP68431 136 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 HOXA4Q00056 320 aaPredicted RBP11.08□□□□□ -0.64
DDX41-204ENST00000504807 FAM209AQ5JX71 171 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 HIST2H3PS2Q5TEC6 136 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 C1orf94Q6P1W5 598 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 FAHD2BQ6P2I3 314 aaPredicted RBP11.08□□□□□ -0.64
DDX41-204ENST00000504807 HIST2H3AQ71DI3 136 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 CYP4Z1Q86W10 505 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 GLB1L2Q8IW92 636 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 OR6V1Q8N148 313 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 CMBLQ96DG6 245 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 CMTM5Q96DZ9 223 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 FAHD2AQ96GK7 314 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 GPR160Q9UJ42 338 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 RPS6KA6Q9UK32 745 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 TMEM5Q9Y2B1 443 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 GRIP1Q9Y3R0 1128 aa11.08□□□□□ -0.64
DDX41-204ENST00000504807 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 C5orf63A6NC05 138 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 CLDN25C9JDP6 229 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 H0YL77 283 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 TRIM77I1YAP6 450 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 XKRYO14609 159 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 ARPC2O15144 300 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 TIMM8AO60220 97 aaPredicted RBP11.07□□□□□ -0.64
DDX41-204ENST00000504807 KHDRBS3O75525 346 aaKnown RBP11.07□□□□□ -0.64
DDX41-204ENST00000504807 FSHBP01225 129 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 IGHV2-70P01814 119 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 HSD17B1P14061 328 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 SELEP16581 610 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 KITLGP21583 273 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 PCBD1P61457 104 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 AQP6Q13520 282 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 KCNMB1Q16558 191 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 HFEQ30201 348 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 MTX3Q5HYI7 312 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 ACSM5Q6NUN0 579 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 LYPD4Q6UWN0 246 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 CFAP77Q6ZQR2 320 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 ALDH16A1Q8IZ83 802 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 OR5AS1Q8N127 324 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 OR1F12Q8NHA8 337 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 ZNF418Q8TF45 676 aaPredicted RBP11.07□□□□□ -0.64
DDX41-204ENST00000504807 ITLN1Q8WWA0 313 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 PYURFQ96I23 114 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 NMNAT3Q96T66 252 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 RBM4Q9BWF3 364 aaKnown RBP11.07□□□□□ -0.64
DDX41-204ENST00000504807 OR52D1Q9H346 318 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 WDR76Q9H967 626 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 TBCCD1Q9NVR7 557 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 PLEK2Q9NYT0 353 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
DDX41-204ENST00000504807 IGHV3-64DA0A0J9YX35 117 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 PLSCR5A0PG75 271 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 H3BSA7 217 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 AHCYL1O43865 530 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 PNPP00491 289 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 HIST1H1CP16403 213 aaKnown RBP11.06□□□□□ -0.64
DDX41-204ENST00000504807 ATP6V1B2P21281 511 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 LSM6P62312 80 aaKnown RBP11.06□□□□□ -0.64
DDX41-204ENST00000504807 LCN2P80188 198 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 TNFAIP6P98066 277 aaPredicted RBP11.06□□□□□ -0.64
DDX41-204ENST00000504807 SPIBQ01892 262 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 SCRN3Q0VDG4 424 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 ZMYND11Q15326 602 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 KRTAP27-1Q3LI81 207 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 GPR139Q6DWJ6 353 aa11.06□□□□□ -0.64
DDX41-204ENST00000504807 SMARCD3Q6STE5 483 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms