RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 SECTM1Q8WVN6 248 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 TMED6Q8WW62 240 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 KCTD13Q8WZ19 329 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 SMARCD2Q92925 531 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 TMEM106AQ96A25 262 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 MIB2Q96AX9 1013 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 CTHRC1Q96CG8 243 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 CPNE2Q96FN4 548 aaPredicted RBP3.18□□□□□ -1.9
PCAT4-201ENST00000504263 SLC35E1Q96K37 410 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 MRGPRX1Q96LB2 322 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 RNF2Q99496 336 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 TIMP4Q99727 224 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 PBDC1Q9BVG4 233 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 OR2J1Q9GZK6 312 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 ZNF350Q9GZX5 532 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 MAGT1Q9H0U3 335 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 SMG9Q9H0W8 520 aaKnown RBP3.18□□□□□ -1.9
PCAT4-201ENST00000504263 CDH20Q9HBT6 801 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 CBLN4Q9NTU7 201 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 SLC2A8Q9NY64 477 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 ZDHHC3Q9NYG2 299 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 OR5AC2Q9NZP5 309 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 H2AFY2Q9P0M6 372 aaPredicted RBP3.18□□□□□ -1.9
PCAT4-201ENST00000504263 GULP1Q9UBP9 304 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 KLK11Q9UBX7 282 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 SLC7A11Q9UPY5 501 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 ANGPT4Q9Y264 503 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 MRPL42Q9Y6G3 142 aaKnown RBP3.18□□□□□ -1.9
PCAT4-201ENST00000504263 COLEC10Q9Y6Z7 277 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 PLXNA3P51805 1871 aa3.18□□□□□ -1.9
PCAT4-201ENST00000504263 NUP214P35658 2090 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 NLRC5Q86WI3 1866 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 LOC105371242A0A075B767 164 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 IGHV2-70DA0A0C4DH43 119 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CBY3A6NI87 242 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FAM72CH0Y354 149 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 PRAMEF26H0Y7S4 382 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 J3KTA2 159 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 DCTN6O00399 190 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 GPR182O15218 404 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CCL25O15444 150 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FGF10O15520 208 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 P2RX6O15547 441 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FFAR2O15552 330 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CDC40O60508 579 aaKnown RBP eCLIP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 B4GALT3O60512 393 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SRPX2O60687 465 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 TNFSF13O75888 250 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 MMP23AO75900 390 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 GLSO94925 669 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SCAF4O95104 1147 aaKnown RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SYNGR4O95473 234 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SLC16A8O95907 504 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CYB5R3P00387 301 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CSTAP01040 98 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 TGFB1P01137 390 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FGF1P05230 155 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 EDN1P05305 212 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 MMP2P08253 660 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 STAG3L3P0CL85 134 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 PGAM2P15259 253 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 AMD1P17707 334 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CXCR1P25024 350 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CHATP28329 748 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 OR10J1P30954 320 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CD52P31358 61 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 DCTDP32321 178 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 NAA10P41227 235 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 AKR1C3P42330 323 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 OR1E2P47887 323 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 GLIPR1P48060 266 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SLC6A11P48066 632 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 RAB7AP51149 207 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 RENBPP51606 427 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 AFF3P51826 1226 aaKnown RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 EFNA3P52797 238 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CRYBB1P53674 252 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 ATP1B3P54709 279 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FGF8P55075 233 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 LIM2P55344 173 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SEC13P55735 322 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 CDC42EP1Q00587 391 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 HMGCS1Q01581 520 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 NHLH1Q02575 133 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 MESP2Q0VG99 397 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 MRPL49Q13405 166 aaKnown RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 TAF13Q15543 124 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 TMEM176BQ3YBM2 270 aaPredicted RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 HIKESHIQ53FT3 197 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 ACSM3Q53FZ2 586 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FAM72AQ5TYM5 149 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FAM71E1Q6IPT2 247 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 FAM72DQ6L9T8 149 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 RPL22L1Q6P5R6 122 aaKnown RBP3.17□□□□□ -1.9
PCAT4-201ENST00000504263 TRIM40Q6P9F5 258 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 TEX38Q6PEX7 206 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 SBSNQ6UWP8 590 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 UNQ6126/PRO20091Q6UXV3 157 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 DPY19L2P2Q6ZN68 376 aa3.17□□□□□ -1.9
PCAT4-201ENST00000504263 COMMD6Q7Z4G1 85 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms