RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 SPNS1Q9H2V7 528 aa3.12□□□□□ -1.91
TRAPPC13-205ENST00000504243 MTCH1Q9NZJ7 389 aa3.12□□□□□ -1.91
TRAPPC13-205ENST00000504243 KCNE3Q9Y6H6 103 aa3.12□□□□□ -1.91
TRAPPC13-205ENST00000504243 TTC41PQ6P2S7 1318 aa3.12□□□□□ -1.91
TRAPPC13-205ENST00000504243 KBTBD11-OT1A0A1B0GTJ5 212 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 SUPT3HB4E1H0 165 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 SLC9A3R1O14745 358 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 RAD51CO43502 376 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 AIREO43918 545 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 U2AF2P26368 475 aaKnown RBP eCLIP3.11□□□□□ -1.917e-7■■■■□ 21.2
TRAPPC13-205ENST00000504243 OR1E1P30953 314 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CASQ1P31415 396 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 P2RX1P51575 399 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 PFN3P60673 137 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CDH17Q12864 832 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 ILKQ13418 452 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 ZNF266Q14584 549 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 TPTE2P1Q5T6R2 138 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 NANOGP8Q6NSW7 305 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 SPESP1Q6UW49 350 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 MICU2Q8IYU8 434 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 SAXO1Q8IYX7 474 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CBR4Q8N4T8 237 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 JAGN1Q8N5M9 183 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CHST4Q8NCG5 386 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 OR10G2Q8NGC3 310 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 OR2L8Q8NGY9 312 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 OR51E1Q8TCB6 317 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 ZNF382Q96SR6 550 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 AUNIPQ9H7T9 357 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 MRM3Q9HC36 420 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 PDP1Q9P0J1 537 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 CLN8Q9UBY8 286 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 NACAE9PAV3 2078 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 UBN2Q6ZU65 1347 aa3.11□□□□□ -1.91
TRAPPC13-205ENST00000504243 PIKFYVEQ9Y2I7 2098 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 GOLGA8TH3BQL2 631 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 M0R3G1 203 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 SCAMP2O15127 329 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 B4GALT5O43286 388 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 FLOT1O75955 427 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 CTDNEP1O95476 244 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 HCAR3P49019 387 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 HSDL1Q3SXM5 330 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 ORMDL2Q53FV1 153 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 CAVIN4Q5BKX8 364 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 FAM78AQ5JUQ0 283 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 ZNF691Q5VV52 312 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 UBE2UQ5VVX9 321 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 ABHD12BQ7Z5M8 362 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 RIMKLAQ8IXN7 391 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 KATNAL2Q8IYT4 538 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 COMMD1Q8N668 190 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 NOXO1Q8NFA2 376 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 CHMP4BQ9H444 224 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 PIGUQ9H490 435 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 ELOVL6Q9H5J4 265 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 SYNDIG1Q9H7V2 258 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 ZDHHC4Q9NPG8 344 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 TBC1D24Q9ULP9 559 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 CAMTA1Q9Y6Y1 1673 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 INSRP06213 1382 aa3.1□□□□□ -1.91
TRAPPC13-205ENST00000504243 IGHV5-10-1A0A0J9YXX1 117 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 SYCE1LA8MT33 242 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 FAM25EA8MYX2 175 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 FOXH1O75593 365 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CLTAP09496 248 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CD3GP09693 182 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CT45A6P0DMU7 189 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CT45A5P0DMU8 189 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CT45A7P0DMV0 189 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 ERGP11308 486 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 RAB3AP20336 220 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 DTYMKP23919 212 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 IL32P24001 234 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CDKN2DP55273 166 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 UBE2MP61081 183 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 PPP1CBP62140 327 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 TMED1Q13445 227 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 ART3Q13508 389 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 EIF4EBP2Q13542 120 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 WDR43Q15061 677 aaKnown RBP eCLIP3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 PON2Q15165 354 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 PGGHGQ32M88 737 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CT45A1Q5HYN5 189 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 PRMT9Q6P2P2 845 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 FBXW12Q6X9E4 464 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 MBOAT2Q6ZWT7 520 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 FAM71AQ8IYT1 594 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 OR52E2Q8NGJ4 325 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 CT45A3Q8NHU0 189 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 RBMXL1Q96E39 390 aaKnown RBP3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 TIMM17AQ99595 171 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 TMEM38AQ9H6F2 299 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 HMG20AQ9NP66 347 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 PXMP2Q9NR77 195 aa3.09□□□□□ -1.91
TRAPPC13-205ENST00000504243 IGLV1-36A0A0B4J1U3 117 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms