RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 GDF1P27539 372 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 PTGS2P35354 604 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 THBS2P35442 1172 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 RRADP55042 308 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 TPTEP56180 551 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CLDN17P56750 224 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 NANOS3P60323 173 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 RPS18P62269 152 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 RPS11P62280 158 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP39-219ENST00000496047 FMODQ06828 376 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 AIMP2Q13155 320 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 CAMK2DQ13557 499 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 FAM189A2Q15884 450 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 RAB11BQ15907 218 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SLC25A35Q3KQZ1 300 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ACER2Q5QJU3 275 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 TMEM69Q5SWH9 247 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 HES3Q5TGS1 186 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 H3F3CQ6NXT2 135 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ESPNLQ6ZVH7 1005 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 GDPD3Q7L5L3 318 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 LINGO2Q7L985 606 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 KRT74Q7RTS7 529 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 NRARPQ7Z6K4 114 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 COMMD2Q86X83 199 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CATSPERDQ86XM0 798 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CADM3Q8N126 398 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 KDM8Q8N371 416 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 IL22RA1Q8N6P7 574 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CCDC54Q8NEL0 328 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SYNPRQ8TBG9 265 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 RNF133Q8WVZ7 376 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 DEDD2Q8WXF8 326 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CPNE4Q96A23 557 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 CREB3L1Q96BA8 519 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ZNF524Q96C55 264 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SLAMF6Q96DU3 332 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 THOC3Q96J01 351 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 FAM173AQ9BQD7 235 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 UTP23Q9BRU9 249 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 THAP7Q9BT49 309 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 C11orf54Q9H0W9 315 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 ZCCHC4Q9H5U6 513 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 AKIRIN1Q9H9L7 192 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 MOV10Q9HCE1 1003 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 SLC17A5Q9NRA2 495 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CENPMQ9NSP4 180 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 MRPL22Q9NWU5 206 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 PAQR5Q9NXK6 330 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 TAS2R8Q9NYW2 309 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 KLHL13Q9P2N7 655 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 OR52A1Q9UKL2 312 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 CACNG2Q9Y698 323 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 R4GN57 208 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 MYO7BQ6PIF6 2116 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 EP300Q09472 2414 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 TRBV5-7A0A0A0MS05 114 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 A0A0G2JMP0 313 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 A0A0X1KG70 313 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 TMEM269A0A1B0GVZ9 245 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 LOC107986453A0A1B0GWG9 222 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 OR2M5A3KFT3 312 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 C4orf47A7E2U8 309 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 BOLA2-SMG1P6H3BVE0 249 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 GABARAPH6UMI1 98 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ACOT7O00154 380 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 EEF1E1O43324 174 aaKnown RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 GSTZ1O43708 216 aaPredicted RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 TRAF3IP2O43734 574 aaPredicted RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 SLC43A1O75387 559 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 TRAPPC6AO75865 159 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 KRT33AO76009 404 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ISG15P05161 165 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ZNF24P17028 368 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 CNR1P21554 472 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 MSR1P21757 451 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 GNALP38405 381 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 KIR3DL2P43630 455 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 CLDN20P56880 219 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 RAC3P60763 192 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 LSM6P62312 80 aaKnown RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 GABREP78334 506 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 PLGLB1Q02325 96 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 DYRK1AQ13627 763 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 P2RY14Q15391 338 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 PCK2Q16822 640 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ODF4Q2M2E3 257 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 CARD17Q5XLA6 110 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 LRFN4Q6PJG9 635 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 SLC25A47Q6Q0C1 308 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 SPATC1Q76KD6 591 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 MDGA2Q7Z553 956 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 LINC00346Q8IVM7 164 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 UBQLNLQ8IYU4 475 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 RDH10Q8IZV5 341 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ZNF283Q8N7M2 679 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 OR4M2Q8NGB6 313 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 OR6M1Q8NGM8 313 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 OR5M1Q8NGP8 315 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 UBASH3BQ8TF42 649 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms