RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 TCN2P20062 427 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 CX3CR1P49238 355 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 VSX2P58304 361 aaPredicted RBP2.29□□□□□ -2.04
VTA1-204ENST00000491881 RAB10P61026 200 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 ESRRGP62508 458 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 SYCNQ0VAF6 134 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 IRF4Q15306 451 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 METTL21CQ5VZV1 264 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 CARD17Q5XLA6 110 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 CEMP1Q6PRD7 247 aaPredicted RBP2.29□□□□□ -2.04
VTA1-204ENST00000491881 PLET1Q6UQ28 207 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 TMEM150AQ86TG1 271 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 IQCKQ8N0W5 287 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 OR4A4PQ8NGN8 299 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 OR2A1Q8NGT9 310 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 ACMSDQ8TDX5 336 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 RNF139Q8WU17 664 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 SEH1LQ96EE3 360 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 ZNF681Q96N22 645 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 SPIN2AQ99865 258 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 SPIN2BQ9BPZ2 258 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 FAM192AQ9GZU8 254 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 RACGAP1Q9H0H5 632 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 C12orf10Q9HB07 376 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 SIRT7Q9NRC8 400 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 GPATCH2LQ9NWQ4 482 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 ZNF282Q9UDV7 671 aaPredicted RBP2.29□□□□□ -2.04
VTA1-204ENST00000491881 LGALS13Q9UHV8 139 aa2.29□□□□□ -2.04
VTA1-204ENST00000491881 TEP1Q99973 2627 aaKnown RBP2.29□□□□□ -2.04
VTA1-204ENST00000491881 CEP170Q5SW79 1584 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 MYO18BQ8IUG5 2567 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 SLIT3O75094 1523 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 RALGAPBQ86X10 1494 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 FAM135BQ49AJ0 1406 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 ARID1AO14497 2285 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 A0A1W2PQ67 120 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 LYRM9A8MSI8 78 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 ZNF705GA8MUZ8 300 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 SIRPB1O00241 398 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 FKBP6O75344 327 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 RDH16O75452 317 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 RP2O75695 350 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 KRT14P02533 472 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 GPX4P36969 197 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 PMELP40967 661 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 STXBP1P61764 594 aaKnown RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 TGM3Q08188 693 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 SRSF5Q13243 272 aaKnown RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 PON2Q15165 354 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 QPRTQ15274 297 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 SF3A2Q15428 464 aaKnown RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 OR7A5Q15622 319 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 MRPL23Q16540 153 aaKnown RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 SMUG1Q53HV7 270 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 HSP90AB3PQ58FF7 597 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 SOHLH1Q5JUK2 328 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 REEP3Q6NUK4 255 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 MBOAT1Q6ZNC8 495 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 CENPQQ7L2Z9 268 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 CALHM1Q8IU99 346 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 UBALD2Q8IYN6 164 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 GTPBP8Q8N3Z3 284 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 ZNF561Q8N587 486 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 METTL13Q8N6R0 699 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 PRELID2Q8N945 189 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 LINC00477Q96M19 166 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 MYCBPQ99417 103 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 SPNS1Q9H2V7 528 aa2.28□□□□□ -2.04
VTA1-204ENST00000491881 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 UBE2ZQ9H832 354 aaPredicted RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 GCN1Q92616 2671 aaKnown RBP2.28□□□□□ -2.04
VTA1-204ENST00000491881 RNF17Q9BXT8 1623 aaKnown RBP2.28□□□□□ -2.05
VTA1-204ENST00000491881 AQRO60306 1485 aaKnown RBP eCLIP2.27□□□□□ -2.05
VTA1-204ENST00000491881 FANCD2Q9BXW9 1451 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 CFAP54Q96N23 3096 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 TMEM223A0PJW6 202 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 C7orf66A4D0T2 115 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 CTAGE15A4D2H0 777 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 OR6C74A6NCV1 312 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 TCP11X1B4DZS4 312 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 RBFOX2O43251 390 aaKnown RBP eCLIP2.27□□□□□ -2.05
VTA1-204ENST00000491881 ERLIN1O75477 346 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 FOXH1O75593 365 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 H6PDO95479 791 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 AGTP01019 485 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 OR56A5P0C7T3 313 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 PABPC4LP0CB38 370 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 GGT1P19440 569 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 DTYMKP23919 212 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 RND2P52198 227 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 EIF3EP60228 445 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 UBE2NP61088 152 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 CDH17Q12864 832 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 RCN1Q15293 331 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 PSMD5Q16401 504 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 ORMDL2Q53FV1 153 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 C22orf42Q6IC83 251 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms