RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 C1GALT1C1LP0DN25 315 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 SSTR5P35346 364 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 PPP1CBP62140 327 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 SP4Q02446 784 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 LIPEQ05469 1076 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 ART3Q13508 389 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 TRAM2Q15035 370 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 SHHQ15465 462 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 CHRNA6Q15825 494 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 CHRFAM7AQ494W8 412 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 ABCA11PQ4W5N1 156 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 TPTE2P1Q5T6R2 138 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 DUX4L9Q6RFH8 374 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 Q6ZR03 302 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 NCCRP1Q6ZVX7 275 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 RIMKLAQ8IXN7 391 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 JAGN1Q8N5M9 183 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 PRELID2Q8N945 189 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 LYPD6BQ8NI32 183 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 TSEN15Q8WW01 171 aaKnown RBP2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 CAPSLQ8WWF8 208 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 EXO5Q9H790 373 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 MTCH1Q9NZJ7 389 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 ENOPH1Q9UHY7 261 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 PSG8Q9UQ74 426 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 ST3GAL6Q9Y274 331 aa2.28□□□□□ -2.04
HMGB1P36-201ENST00000487709 WDR62O43379 1518 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 TRAV40A0A0B4J280 105 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 A0A1W2PQ67 120 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 SYCE1LA8MT33 242 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 SERPINE3A8MV23 424 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 WRBO00258 174 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 SCAMP2O15127 329 aaKnown RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 CHST10O43529 356 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 CHST1O43916 411 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 RP2O75695 350 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 TLX1NBP0CAT3 122 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 U2AF2P26368 475 aaKnown RBP eCLIP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 CASQ1P31415 396 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 GPX4P36969 197 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 UQCRFS1P47985 274 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF138P52744 262 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 ESRRGP62508 458 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 CCNA1P78396 465 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 IRX3P78415 501 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 TMED1Q13445 227 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 IL18Q14116 193 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 COX19Q49B96 90 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 PLET1Q6UQ28 207 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 SPESP1Q6UW49 350 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 ANGPTL8Q6UXH0 198 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 Q6ZSR3 168 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 GABRG1Q8N1C3 465 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 OTUD6BQ8N6M0 293 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 BBOF1Q8ND07 529 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR5K2Q8NHB8 316 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR51E1Q8TCB6 317 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 LRRC29Q8WV35 223 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 RGP1Q92546 391 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 C8orf44Q96CB5 159 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 LRRC58Q96CX6 371 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR10C1Q96KK4 312 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF681Q96N22 645 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 TIMM17AQ99595 171 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 HSD17B10Q99714 261 aaKnown RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 SPNS1Q9H2V7 528 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 C1orf198Q9H425 327 aa2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 UBE2ZQ9H832 354 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 C20orf96Q9NUD7 363 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 NUP214P35658 2090 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P36-201ENST00000487709 PCM1Q15154 2024 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF705GA8MUZ8 300 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SPECC1L-ADORA2AF8WAN1 911 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SMKR1H3BMG3 65 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SEMA3DO95025 777 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 LSM8O95777 96 aaKnown RBP2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 IL4P05112 153 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SERPINE2P07093 398 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 ERCC1P07992 297 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 ADRA2AP08913 450 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 CD3GP09693 182 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 POLR2MP0CAP2 368 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 PRRX1P54821 245 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SYNJ2BPP57105 145 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 CACNG7P62955 275 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 BEX3Q00994 111 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SYCNQ0VAF6 134 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SELENBP1Q13228 472 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 PON2Q15165 354 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 BEX5Q5H9J7 111 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SOHLH1Q5JUK2 328 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 GPR107Q5VW38 600 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SPECC1LQ69YQ0 1117 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 PRMT9Q6P2P2 845 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 MBOAT2Q6ZWT7 520 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SCD5Q86SK9 330 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms