RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 BMP4P12644 408 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 IFNGR1P15260 489 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 EDNRAP25101 427 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SRD5A2P31213 254 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SFTPDP35247 375 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TGM4P49221 684 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 MTNR1BP49286 362 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 GDI2P50395 445 aaKnown RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 PPP5CP53041 499 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 HCCSP53701 268 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CLDN18P56856 261 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 LCN6P62502 163 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 HNRNPA0Q13151 305 aaKnown RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 MELKQ14680 651 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CDK5R1Q15078 307 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 RGS21Q2M5E4 152 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 MS4A18Q3C1V0 323 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TMEM176BQ3YBM2 270 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 DDI2Q5TDH0 399 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SLC18B1Q6NT16 456 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 KCTD18Q6PI47 426 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CEACAM19Q7Z692 300 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TPRA1Q86W33 373 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CDC20BQ86Y33 519 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 MCEMP1Q8IX19 187 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TIGD4Q8IY51 512 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 YIPF7Q8N8F6 280 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 POC1BQ8TC44 478 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 THEM6Q8WUY1 208 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 ASB10Q8WXI3 467 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 PHYHIPQ92561 330 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 PELI1Q96FA3 418 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TRMT61AQ96FX7 289 aaKnown RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TSSK2Q96PF2 358 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SMURF1Q9HCE7 757 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 QPCTLQ9NXS2 382 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 COQ3Q9NZJ6 369 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 IKZF2Q9UKS7 526 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 RASD1Q9Y272 281 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CMAHPQ9Y471 501 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SLC22A23A1A5C7 686 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 TVP23AA6NH52 213 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF726A6NNF4 738 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 FZD7O75084 574 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 GATBO75879 557 aaKnown RBP6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF432O94892 652 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 VAMP5O95183 116 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 PMS2P2O95744 297 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 IGHG1P01857 330 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 SPARCP09486 303 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF708P17019 499 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF43P17038 809 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 KLK2P20151 261 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 CHRNB4P30926 498 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 CLRN1P58418 232 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF181Q2M3W8 571 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ACSM3Q53FZ2 586 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 DMKNQ6E0U4 476 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-216ENST00000484087 MTFR2Q6P444 385 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 XKRXQ6PP77 449 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 MEX3BQ6ZN04 569 aaKnown RBP6.13□□□□□ -1.43
BRCA1-216ENST00000484087 TMPPEQ6ZT21 453 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 SSX6Q7RTT6 188 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 DPY19L4Q7Z388 723 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 GPAT4Q86UL3 456 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 KDM8Q8N371 416 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 MINDY2Q8NBR6 621 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 OR10H5Q8NGA6 315 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ABHD4Q8TB40 342 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 SMAP2Q8WU79 429 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ZNRF4Q8WWF5 429 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 NANOS1Q8WY41 292 aaKnown RBP6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ACOT12Q8WYK0 555 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 NRGNQ92686 78 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 THRSPQ92748 146 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 GHSRQ92847 366 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 OXGR1Q96P68 337 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 SLC30A2Q9BRI3 323 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 MROQ9BYG7 248 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 TTTY10Q9BZA0 68 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 COMMD4Q9H0A8 199 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 MARCH7Q9H992 704 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 ACOXLQ9NUZ1 547 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 CLEC4AQ9UMR7 237 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 COPS3Q9UNS2 423 aa6.13□□□□□ -1.43
BRCA1-216ENST00000484087 OTOGQ6ZRI0 2925 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ARPC4-TTLL3A0A0A6YYG9 625 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 LOC102725191A0A1B0GVB3 256 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 A0A1W2PNR3 127 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ISPDA4D126 451 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF879B4DU55 563 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 EEF1E1-BLOC1S5C9J1V9 151 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 E9PI62 339 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 LINC01387J3KSC0 135 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 DCTN6O00399 190 aa6.12□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF593O00488 134 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 EEF1E1O43324 174 aaKnown RBP6.12□□□□□ -1.43
BRCA1-216ENST00000484087 DNPH1O43598 174 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms