RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FITM1A5D6W6 292 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 IL18BPO95998 194 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 FGF7P21781 194 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 CDS1Q92903 461 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 THOC3Q96J01 351 aaKnown RBP19.14■□□□□ 0.65
SDF4-206ENST00000478938 PDE7BQ9NP56 450 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 FAM212BQ9NTI7 297 aaPredicted RBP19.14■□□□□ 0.65
SDF4-206ENST00000478938 SLC2A8Q9NY64 477 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 KLHDC2Q9Y2U9 406 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 IER3IP1Q9Y5U9 82 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 CCDC187A0A096LP49 1063 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 C9J4A7 227 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 STK17BO94768 372 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 CSTBP04080 98 aaKnown RBP19.14■□□□□ 0.65
SDF4-206ENST00000478938 CX3CR1P49238 355 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 GAS6Q14393 721 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 SLC22A6Q4U2R8 563 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 TMEM268Q5VZI3 342 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 R3HDM4Q96D70 268 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 NMNAT3Q96T66 252 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 CDC6Q99741 560 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 EPHX3Q9H6B9 360 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 CLEC4EQ9ULY5 219 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 TMED3Q9Y3Q3 217 aa19.14■□□□□ 0.65
SDF4-206ENST00000478938 A0A087WUJ7 227 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 A0A1B0GV50 99 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 ZNF840PA6NDX5 716 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 ZNF432O94892 652 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 GZMBP10144 247 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 SLC6A6P31641 620 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 SSR2P43308 183 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 SRSF5Q13243 272 aaKnown RBP19.13■□□□□ 0.65
SDF4-206ENST00000478938 ELOBQ15370 118 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 ZNF793Q6ZN11 406 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 ZNF761Q86XN6 746 aaPredicted RBP19.13■□□□□ 0.65
SDF4-206ENST00000478938 SLC16A11Q8NCK7 471 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 GNRHR2Q96P88 292 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 PRRT1Q99946 306 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 SLC25A31Q9H0C2 315 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 TAC3Q9UHF0 121 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 FBXL21Q9UKT6 434 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 PADI3Q9ULW8 664 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 HEATR5BQ9P2D3 2071 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 DLEU1O43261 78 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 TRGC1P0CF51 173 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 TACR3P29371 465 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 PRLHRP49683 370 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 ERVFRD-1P60508 538 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 MOGAT2Q3SYC2 334 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 ZNF584Q8IVC4 421 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 CXorf40AQ8TE69 158 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 LRFN5Q96NI6 719 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 PRAP1Q96NZ9 151 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 C6orf106Q9H6K1 298 aaPredicted RBP19.13■□□□□ 0.65
SDF4-206ENST00000478938 C19orf12Q9NSK7 152 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 MARCH5Q9NX47 278 aa19.13■□□□□ 0.65
SDF4-206ENST00000478938 CYB5BO43169 146 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 ZNF354AO60765 605 aaPredicted RBP19.12■□□□□ 0.65
SDF4-206ENST00000478938 HTR2CP28335 458 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 FHITP49789 147 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 EIF5AP63241 154 aaKnown RBP19.12■□□□□ 0.65
SDF4-206ENST00000478938 COTL1Q14019 142 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 C4orf17Q53FE4 359 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 ZNF684Q5T5D7 378 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 TMCO2Q7Z6W1 182 aaPredicted RBP19.12■□□□□ 0.65
SDF4-206ENST00000478938 ZNF417Q8TAU3 575 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 M1APQ8TC57 530 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 MACROD1Q9BQ69 325 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 SMIM3Q9BZL3 60 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 SRMSQ9H3Y6 488 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 WDR45Q9Y484 360 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 CACNA1CQ13936 2221 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 VWA8A3KMH1 1905 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 A0A087WZY1 265 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 TRBV5-7A0A0A0MS05 114 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 NPIPA5A0A0B4J1W7 369 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 NPIPA7E9PJI5 369 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 UPK3AO75631 287 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 NPIPA8P0DM63 369 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 IGFALSP35858 605 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 S100A10P60903 97 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 RASGEF1BQ0VAM2 473 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 RAB32Q13637 225 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 FHL1Q13642 323 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 SSPNQ14714 243 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 SLC10A1Q14973 349 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 C17orf64Q86WR6 236 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 ZNF764Q96H86 408 aaPredicted RBP19.12■□□□□ 0.65
SDF4-206ENST00000478938 SLC35B3Q9H1N7 401 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 TCEAL2Q9H3H9 227 aaPredicted RBP19.12■□□□□ 0.65
SDF4-206ENST00000478938 CHRNA9Q9UGM1 479 aa19.12■□□□□ 0.65
SDF4-206ENST00000478938 MRM2Q9UI43 246 aaKnown RBP19.12■□□□□ 0.65
SDF4-206ENST00000478938 MED19A0JLT2 244 aaPredicted RBP19.11■□□□□ 0.65
SDF4-206ENST00000478938 A6NNC1 897 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 CXCL11O14625 94 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 PSMB5P28074 263 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 CYCSP99999 105 aaKnown RBP19.11■□□□□ 0.65
SDF4-206ENST00000478938 JAGN1Q8N5M9 183 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 GVQW1Q8N7I0 195 aa19.11■□□□□ 0.65
SDF4-206ENST00000478938 ZNF676Q8N7Q3 588 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms