RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 VSX2P58304 361 aaPredicted RBP1.8□□□□□ -2.12
TARDBP-208ENST00000477447 EIF3EP60228 445 aaKnown RBP1.8□□□□□ -2.12
TARDBP-208ENST00000477447 PPP1CBP62140 327 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 IFT88Q13099 833 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 QPRTQ15274 297 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 MRPL23Q16540 153 aaKnown RBP1.8□□□□□ -2.12
TARDBP-208ENST00000477447 CHRFAM7AQ494W8 412 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 PRAMEF20Q5VT98 475 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 GPR107Q5VW38 600 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 WDFY1Q8IWB7 410 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 OR7G2Q8NG99 324 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 OR10AD1Q8NGE0 317 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 RAB3IL1Q8TBN0 382 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 ELMO1Q92556 727 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 TMEM230Q96A57 120 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 EEF1AKMT3Q96AZ1 226 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 ECHDC3Q96DC8 303 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 DNAJC1Q96KC8 554 aaKnown RBP1.8□□□□□ -2.12
TARDBP-208ENST00000477447 ZNF488Q96MN9 340 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 RNF5Q99942 180 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 FOXC2Q99958 501 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 NEUROG2Q9H2A3 272 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 ANKRA2Q9H9E1 313 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 EDA2RQ9HAV5 297 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 PITPNC1Q9UKF7 332 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 COL1A2P08123 1366 aa1.8□□□□□ -2.12
TARDBP-208ENST00000477447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.8□□□□□ -2.12
TARDBP-208ENST00000477447 IGLV3-12A0A075B6K2 115 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 IGHV1OR15-9A0A0B4J2B8 117 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ZNF850A8MQ14 1090 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 C9JVG2 144 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 RPL36A-HNRNPH2H7BZ11 118 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 UBXN8O00124 270 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 BPY2O14599 106 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 SNX4O95219 450 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 IL4P05112 153 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 DCNP07585 359 aaKnown RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ERGP11308 486 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 RAB3AP20336 220 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 CDKN2DP55273 166 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 RAB10P61026 200 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 STXBP1P61764 594 aaKnown RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 SP4Q02446 784 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ZNF816Q0VGE8 651 aaPredicted RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 KRTAP13-2Q52LG2 175 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 DNLZQ5SXM8 178 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ARMC12Q5T9G4 340 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 UBE2UQ5VVX9 321 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 RAET1LQ5VY80 246 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 C22orf42Q6IC83 251 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 REEP3Q6NUK4 255 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ZFP1Q6P2D0 407 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 BHLHA15Q7RTS1 189 aaPredicted RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 CMTM1Q8IZ96 169 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 MYOCDQ8IZQ8 938 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 OR4A4PQ8NGN8 299 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 NUBPLQ8TB37 319 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ACMSDQ8TDX5 336 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 CAPSLQ8WWF8 208 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 PTX4Q96A99 478 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 PLIN2Q99541 437 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 DOK1Q99704 481 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 ULBP2Q9BZM5 246 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 OR52D1Q9H346 318 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 SLC38A10Q9HBR0 1119 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 TMEM9BQ9NQ34 198 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 FBXO6Q9NRD1 293 aaPredicted RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 MARCOQ9UEW3 520 aaPredicted RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 TSSC4Q9Y5U2 329 aaPredicted RBP1.79□□□□□ -2.12
TARDBP-208ENST00000477447 TNS2Q63HR2 1409 aa1.79□□□□□ -2.12
TARDBP-208ENST00000477447 CAMTA1Q9Y6Y1 1673 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 YEATS2Q9ULM3 1422 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 A0A1B0GW55 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 OR2AG2A6NM03 316 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 K7EMT4 169 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 SIRPB1O00241 398 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 EIF3HO15372 352 aaKnown RBP eCLIP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 NVLO15381 856 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CCNE2O96020 404 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 IGHDP01880 384 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 HLA-DQA1P01909 254 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 FTH1P02794 183 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 PABPC4LP0CB38 370 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DUX4L2P0CJ85 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DUX4L3P0CJ86 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DUX4L5P0CJ88 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DUX4L6P0CJ89 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DUX4L7P0CJ90 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CELP19835 753 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 EIF2S2P20042 333 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 U2AF2P26368 475 aaKnown RBP eCLIP1.78□□□□□ -2.128e-11■□□□□ 9.8
TARDBP-208ENST00000477447 CXCL12P48061 93 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CRISP1P54107 249 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CDK5Q00535 292 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 TGM3Q08188 693 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 SELENBP1Q13228 472 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CHRNA6Q15825 494 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 PSMD5Q16401 504 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 AVPI1Q5T686 147 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 AP1ARQ63HQ0 302 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms