RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 GPX8Q8TED1 209 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 ZNF414Q96IQ9 312 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 SLC17A9Q9BYT1 436 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 IFI27L2Q9H2X8 130 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 SAV1Q9H4B6 383 aaPredicted RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 MRPL22Q9NWU5 206 aaKnown RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 CLN6Q9NWW5 311 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 MYEF2Q9P2K5 600 aaKnown RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 ZNF223Q9UK11 482 aaPredicted RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 ASTN1O14525 1302 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 ANKRD63C9JTQ0 380 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 BCKDKO14874 412 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 GABARAPO95166 117 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 FGFR1OPO95684 399 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 HBE1P02100 147 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 IFNW1P05000 195 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 BCHEP06276 602 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 EIF4EP06730 217 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 RETP07949 1114 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 RALBP11234 206 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 CSNK2A2P19784 350 aaPredicted RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 TNFSF9P41273 254 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 CSNK1A1P48729 337 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 RAD51Q06609 339 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 RGNQ15493 299 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 HIKESHIQ53FT3 197 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 LINC01551Q86U37 167 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 APRG1Q8IVJ8 170 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 LRRC75AQ8NAA5 344 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 C11orf72Q8NBR9 251 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 OR52E2Q8NGJ4 325 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 TMEM230Q96A57 120 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 ISG20Q96AZ6 181 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 EXOSC8Q96B26 276 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 IQCGQ9H095 443 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 PARP12Q9H0J9 701 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 C8orf33Q9H7E9 229 aaPredicted RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 UBE2ZQ9H832 354 aaPredicted RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 RPRD1BQ9NQG5 326 aaKnown RBP3.7□□□□□ -1.82
VPS50-212ENST00000476413 PLEKHG2Q9H7P9 1386 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 MROH7-TTC4A0A0A0MT08 1334 aa3.7□□□□□ -1.82
VPS50-212ENST00000476413 IGLV4-69A0A075B6H9 119 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 SIVA1O15304 175 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 SNAI2O43623 268 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 AZU1P20160 251 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 U2AF2P26368 475 aaKnown RBP eCLIP3.69□□□□□ -1.82
VPS50-212ENST00000476413 MAGEA1P43355 309 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 OR1G1P47890 313 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 UCNP55089 124 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 CLDN18P56856 261 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 GINS1Q14691 196 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 NCF4Q15080 339 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 DEFB116Q30KQ4 102 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 TRMT5Q32P41 509 aaKnown RBP3.69□□□□□ -1.82
VPS50-212ENST00000476413 BEX5Q5H9J7 111 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 THEM4Q5T1C6 240 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 ZFP2Q6ZN57 461 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 Q6ZR03 302 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 MBOAT2Q6ZWT7 520 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 FAM122BQ7Z309 247 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 OPALINQ96PE5 141 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 PEF1Q9UBV8 284 aaKnown RBP3.69□□□□□ -1.82
VPS50-212ENST00000476413 RHBDD3Q9Y3P4 386 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 GAKO14976 1311 aa3.69□□□□□ -1.82
VPS50-212ENST00000476413 L7N2F9 121 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 LSM8O95777 96 aaKnown RBP3.68□□□□□ -1.82
VPS50-212ENST00000476413 HLA-DPB1P04440 258 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 CD3GP09693 182 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 RAB4AP20338 218 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 MAGP20916 626 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 CCT6AP40227 531 aaKnown RBP3.68□□□□□ -1.82
VPS50-212ENST00000476413 SLC11A1P49279 550 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 PPOXP50336 477 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 RAB11AP62491 216 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 ERCC8Q13216 396 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 QPRTQ15274 297 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 RAB11BQ15907 218 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 KLHL40Q2TBA0 621 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 METTL21CQ5VZV1 264 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 PLCXD3Q63HM9 321 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 TMEM205Q6UW68 189 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 Q6ZVH6 145 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 ARRDC1Q8N5I2 433 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 ABHD3Q8WU67 409 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 APH1BQ8WW43 257 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 JSRP1Q96MG2 331 aaPredicted RBP3.68□□□□□ -1.82
VPS50-212ENST00000476413 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 ZNF317Q96PQ6 595 aaPredicted RBP3.68□□□□□ -1.82
VPS50-212ENST00000476413 C12orf10Q9HB07 376 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 PXMP2Q9NR77 195 aa3.68□□□□□ -1.82
VPS50-212ENST00000476413 A6NDN8 102 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 ZNF99A8MXY4 864 aaPredicted RBP3.67□□□□□ -1.82
VPS50-212ENST00000476413 H7C1H1 209 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 H7C417 338 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 DOC2AQ14183 400 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 RPEL1Q2QD12 228 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 TPTE2P1Q5T6R2 138 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 CHST4Q8NCG5 386 aa3.67□□□□□ -1.82
VPS50-212ENST00000476413 FOXC2Q99958 501 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms