RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ZNF585AQ6P3V2 769 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LINC00114Q6XXX2 140 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF550Q7Z398 422 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PXKQ7Z7A4 578 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TPRA1Q86W33 373 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LRRC28Q86X40 367 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LIX1LQ8IVB5 337 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LINC00518Q8N0U6 118 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF808Q8N4W9 903 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LINC00469Q8N7U9 141 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 GATSQ8NAP1 163 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 FAM71CQ8NEG0 241 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SDR9C7Q8NEX9 313 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 OR10Z1Q8NGY1 313 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 GPR119Q8TDV5 335 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ST8SIA1Q92185 356 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ST8SIA4Q92187 359 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZC3HAV1LQ96H79 300 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 WDYHV1Q96HA8 205 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 MRGPRX4Q96LA9 322 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PGLYRP3Q96LB9 341 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 UCN2Q96RP3 112 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 DMRTA2Q96SC8 542 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NMNAT3Q96T66 252 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RTN4RQ9BZR6 473 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TRIM2Q9C040 744 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ABCG5Q9H222 651 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PPA2Q9H2U2 334 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SAV1Q9H4B6 383 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 INPP5EQ9NRR6 644 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SERINC1Q9NRX5 453 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 DNAJB12Q9NXW2 375 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 HAO2Q9NYQ3 351 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ERRFI1Q9UJM3 462 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ICAM5Q9UMF0 924 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 CAMK2AQ9UQM7 478 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TMEM5Q9Y2B1 443 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SLC6A5Q9Y345 797 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ADAM18Q9Y3Q7 739 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NCKAP5O14513 1909 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SPTA1P02549 2419 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TRAV6A0A075B6T7 132 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ARPC4-TTLL3A0A0A6YYG9 625 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 A0A0G2JK05 382 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 WIPF3A6NGB9 483 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 HSPB2A8KAH6 182 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 FAM171A2A8MVW0 826 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 BLOC1S5-TXNDC5H3BN57 136 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PYCARD-AS1I3L0S3 204 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PSMD9O00233 223 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ORC5O43913 435 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SC5DO75845 299 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TFP02787 698 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 HRGP04196 525 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 GP1BBP13224 206 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SNRPBP14678 240 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF708P17019 499 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 CD53P19397 219 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RAB3BP20337 219 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NPR2P20594 1047 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SLC6A1P30531 599 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RPL4P36578 427 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NAA10P41227 235 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 APOBEC1P41238 236 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RPL35P42766 123 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 MAGEB1P43366 347 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LHX2P50458 406 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF81P51508 661 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 B3GALT5-AS1P59052 145 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RAC1P63000 192 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PON3Q15166 354 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 HSPB2Q16082 182 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RNASE12Q5GAN4 147 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NSUN5P2Q63ZY6 315 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ULK3Q6PHR2 472 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ESPNLQ6ZVH7 1005 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 FJX1Q86VR8 437 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 MS4A15Q8N5U1 240 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 OR11H4Q8NGC9 324 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TRMT10AQ8TBZ6 339 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SNX33Q8WV41 574 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RND1Q92730 232 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RFT1Q96AA3 541 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 KCTD12Q96CX2 325 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ORAI1Q96D31 301 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PELI1Q96FA3 418 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LINC00052Q96N35 136 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZFP3Q96NJ6 502 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PDCD1LG2Q9BQ51 273 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 USB1Q9BQ65 265 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF426Q9BUY5 554 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 CLEC4MQ9H2X3 399 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 BRD7Q9NPI1 651 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 MRPL39Q9NYK5 338 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RPS6KB2Q9UBS0 482 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 CHRNA9Q9UGM1 479 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TINAGQ9UJW2 476 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ELF5Q9UKW6 265 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ING4Q9UNL4 249 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms