RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DNM1P34Q6PK57 102 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF627Q7L945 461 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 BVESQ8NE79 360 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 OR13C3Q8NGS6 347 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 MFSD8Q8NHS3 518 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 FANCFQ9NPI8 374 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 PFDN2Q9UHV9 154 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 RANBP2P49792 3224 aaKnown RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF736B4DX44 427 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 M0QYG6 137 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 CYB5AP00167 134 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 HPP00738 406 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 AMY2AP04746 511 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 IL11P20809 199 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 AGTR1P30556 359 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 DNASE1L1P49184 302 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF260Q3ZCT1 412 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 LHFPL5Q8TAF8 219 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 RNF133Q8WVZ7 376 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 TMEM234Q8WY98 164 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ST8SIA1Q92185 356 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 CMKLR1Q99788 373 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 TTYH1Q9H313 450 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 KLHL13Q9P2N7 655 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 GDF2Q9UK05 429 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 IGHV1OR21-1A0A087WYE8 117 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 DCDC2BA2VCK2 349 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ANKUB1A6NFN9 424 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 RHPN2P1A8MT19 583 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 RAB27BO00194 218 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 UBCP0CG48 685 aaKnown RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 SLC25A4P12235 298 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF823P16415 610 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 MGMTP16455 207 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 NAGAP17050 411 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 HSD11B1P28845 292 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 DAP3P51398 398 aaKnown RBP12.2□□□□□ -0.46
BRCA1-209ENST00000470026 QRFPP83859 136 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 SPOCK1Q08629 439 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 FGL1Q08830 312 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 DHRS2Q13268 280 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF345Q14585 488 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 MEF2DQ14814 521 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZMYND11Q15326 602 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 RAB12Q6IQ22 244 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 C11orf88Q6PI97 169 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 DCXRQ7Z4W1 244 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 PDZD9Q8IXQ8 264 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF248Q8NDW4 579 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 OR4D6Q8NGJ1 314 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 SLC6A7Q99884 636 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 SLC25A32Q9H2D1 315 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 RAB22AQ9UL26 194 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 EXPH5Q8NEV8 1989 aa12.2□□□□□ -0.46
BRCA1-209ENST00000470026 IGKV1D-43A0A0B4J1Z2 117 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 A0A0D9SG52 128 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 A0A1B0GX78 115 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 CPED1A4D0V7 1026 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TMEM200CA6NKL6 621 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 IL2RAP01589 272 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 FCER2P06734 321 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 PRKACBP22694 351 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 PPM1FP49593 454 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 SUMO3P55854 103 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 PXDC1Q5TGL8 231 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF529Q6P280 563 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TMEM81Q6P7N7 255 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 CORO6Q6QEF8 472 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 H1FNTQ75WM6 255 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 BPIFB2Q8N4F0 458 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 PAQR4Q8N4S7 273 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 STEAP2Q8NFT2 490 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TSTD1Q8NFU3 115 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 OR1J2Q8NGS2 313 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 RNF138Q8WVD3 245 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 FBLN5Q9UBX5 448 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 GLS2Q9UI32 602 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 SEC16AO15027 2179 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TMEM269A0A1B0GVZ9 245 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 TRIM77I1YAP6 450 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 ETV2O00321 342 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 ZNF208O43345 1280 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 LMX1BO60663 402 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 UBBP0CG47 229 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 FOLR1P15328 257 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 ZBTB25P24278 435 aa12.19□□□□□ -0.46
BRCA1-209ENST00000470026 HNRNPKP61978 463 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 RPS27AP62979 156 aaKnown RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 UBA52P62987 128 aaKnown RBP12.19□□□□□ -0.46
BRCA1-209ENST00000470026 FMODQ06828 376 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms