RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 IL11P20809 199 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 RPS19P39019 145 aaKnown RBP12.2□□□□□ -0.46
HDAC6-215ENST00000465457 OR12D2P58182 307 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 LCN6P62502 163 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 TMEM176BQ3YBM2 270 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-215ENST00000465457 VASNQ6EMK4 673 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 ARL9Q6T311 187 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 TPRA1Q86W33 373 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 ZFP41Q8N8Y5 198 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 PELI1Q96FA3 418 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
HDAC6-215ENST00000465457 JSRP1Q96MG2 331 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-215ENST00000465457 RBP7Q96R05 134 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 KCNK17Q96T54 332 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 OR2B2Q9GZK3 357 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 RNF167Q9H6Y7 350 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 ZFP64Q9NPA5 681 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 KLHL13Q9P2N7 655 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 USF3Q68DE3 2245 aa12.2□□□□□ -0.46
HDAC6-215ENST00000465457 OR2M5A3KFT3 312 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SHISA8B8ZZ34 492 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 DVL2O14641 736 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 CASKO14936 926 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 ZIC3O60481 467 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 TMEM127O75204 238 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 CRLF1O75462 422 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 KHDRBS3O75525 346 aaKnown RBP12.19□□□□□ -0.46
HDAC6-215ENST00000465457 ARL6IP5O75915 188 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 IGHG1P01857 330 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 HLA-DQA2P01906 255 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 MYL9P24844 172 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 ETV6P41212 452 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 MELKQ14680 651 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 TP53I3Q53FA7 332 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 TEX30Q5JUR7 227 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SPANXN2Q5MJ10 180 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 THEM4Q5T1C6 240 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF684Q5T5D7 378 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 TMEM225Q6GV28 225 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SLC18B1Q6NT16 456 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 KCTD18Q6PI47 426 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SSX6Q7RTT6 188 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF511Q8NB15 262 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 OR6N2Q8NGY6 317 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 OR6X1Q8NH79 312 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 OTOSQ8NHW6 89 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 RPS4Y2Q8TD47 263 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 ZNRF4Q8WWF5 429 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SARAFQ96BY9 339 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 PERPQ96FX8 193 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 TSSK2Q96PF2 358 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SLC6A15Q9H2J7 730 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SMURF1Q9HCE7 757 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 SNTG1Q9NSN8 517 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 KLHL9Q9P2J3 617 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 COPS3Q9UNS2 423 aa12.19□□□□□ -0.46
HDAC6-215ENST00000465457 TRBV2A0A0J9YWF9 115 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 LRRC3CA6NJW4 275 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 DCTN6O00399 190 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 SC5DO75845 299 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF432O94892 652 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 RFPL3SP0C7P2 107 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF12P17014 697 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF43P17038 809 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ALOX5APP20292 161 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 MAPK3P27361 379 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-215ENST00000465457 SFTPDP35247 375 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 GDI2P50395 445 aaKnown RBP12.18□□□□□ -0.46
HDAC6-215ENST00000465457 P2RY4P51582 365 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ACSF3Q4G176 576 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-215ENST00000465457 YIF1BQ5BJH7 314 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 LSRQ86X29 649 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-215ENST00000465457 NOXO1Q8NFA2 376 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 OR14L1PQ8NHC6 308 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ABHD4Q8TB40 342 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 ACOT12Q8WYK0 555 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 SLC25A44Q96H78 314 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-215ENST00000465457 PGLYRP3Q96LB9 341 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 CEP19Q96LK0 163 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 WDFY2Q96P53 400 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 HDHD5Q9BXW7 423 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 LDAHQ9H6V9 325 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 EXO5Q9H790 373 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 TMEM185BQ9H7F4 350 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 B3GAT1Q9P2W7 334 aa12.18□□□□□ -0.46
HDAC6-215ENST00000465457 MED12LQ86YW9 2145 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 TRGV5A0A0B4J1U4 118 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 ZNF879B4DU55 563 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 LOC110117498-PIK3R3F6TDL0 507 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SIAH2O43255 324 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 TRAF3IP2O43734 574 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-215ENST00000465457 SMPD2O60906 423 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 TMCC2O75069 709 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 AQP8O94778 261 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 BMP4P12644 408 aa12.17□□□□□ -0.46
HDAC6-215ENST00000465457 HLA-DOBP13765 273 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms