RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 ZNF718Q3SXZ3 478 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 LINC01590Q5TEZ4 76 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 SLX4IPQ5VYV7 408 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 MBNL2Q5VZF2 373 aaKnown RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 SLC18B1Q6NT16 456 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 SHFQ7M4L6 423 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 OR5L1Q8NGL2 311 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 NEU4Q8WWR8 484 aaPredicted RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 PKP2Q99959 881 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 C9orf16Q9BUW7 83 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 GABARAPL3Q9BY60 117 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 RAB1BQ9H0U4 201 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 SEMA6AQ9H2E6 1030 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 MYOZ1Q9NP98 299 aaPredicted RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 MRPL22Q9NWU5 206 aaKnown RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 CGGBP1Q9UFW8 167 aaPredicted RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 TMEFF2Q9UIK5 374 aaPredicted RBP11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 ORC6Q9Y5N6 252 aa11.3□□□□□ -0.6
CUEDC2-202ENST00000465409 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 RER1O15258 196 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 ALPLP05186 524 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 CCNOP22674 350 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 GSTT1P30711 240 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 ENTPD1P49961 510 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 RAD23AP54725 363 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 PQLC1Q8N2U9 271 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 PAQR4Q8N4S7 273 aaPredicted RBP11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 IQCF1Q8N6M8 205 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 OR1J1Q8NGS3 322 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 TRUB1Q8WWH5 349 aaKnown RBP11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 STMN2Q93045 179 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 PERPQ96FX8 193 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 MARS2Q96GW9 593 aaKnown RBP11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 CIB1Q99828 191 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 C8orf4Q9NR00 106 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 VPS13CQ709C8 3753 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 ARID1AO14497 2285 aa11.29□□□□□ -0.6
CUEDC2-202ENST00000465409 FAM171A2A8MVW0 826 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 ZNF593O00488 134 aaPredicted RBP11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 GPRIN2O60269 458 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 APOC1P02654 83 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 MT-ND5P03915 603 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 LCKP06239 509 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 CSF3P09919 207 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 CCL2P13500 99 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 GCH1P30793 250 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 PYCR1P32322 319 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 CDKN1AP38936 164 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 WNT5AP41221 380 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 SLC15A1P46059 708 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 ALDH3A2P51648 485 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 KLF3P57682 345 aaPredicted RBP11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 MEP1BQ16820 701 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 Q5PR19 223 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 C12orf73Q69YU5 71 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 PLBD1Q6P4A8 553 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 CPOQ8IVL8 374 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 ICA1LQ8NDH6 482 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 OR9Q1Q8NGQ5 310 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 SPTSSAQ969W0 71 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 FOXN4Q96NZ1 517 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 INTS14Q96SY0 518 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 TEAD3Q99594 435 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 PITX2Q99697 317 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 ATF6BQ99941 703 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 TOR3AQ9H497 397 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 SP140LQ9H930 580 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 CYSLTR2Q9NS75 346 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 TVP23BQ9NYZ1 205 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 COMMD3-BMI1R4GMX3 469 aa11.28□□□□□ -0.6
CUEDC2-202ENST00000465409 FAM183AA6NL82 134 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 M0R233 179 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 ABHD16AO95870 558 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 GPANK1O95872 356 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 IGHV4-39P01824 125 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 FAM157BP0CG42 384 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 SLC2A5P22732 501 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 TPTEP56180 551 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 PPP1CBP62140 327 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 MRPS11P82912 194 aaKnown RBP11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 TMED1Q13445 227 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 PCGF3Q3KNV8 242 aa11.27□□□□□ -0.61
CUEDC2-202ENST00000465409 NXNL2Q5VZ03 156 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms