RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 MCHR2Q969V1 340 aa14.9□□□□□ -0.02
EXOSC3-203ENST00000465229 RBP7Q96R05 134 aa14.9□□□□□ -0.02
EXOSC3-203ENST00000465229 CCDC32Q9BV29 185 aa14.9□□□□□ -0.02
EXOSC3-203ENST00000465229 LINC00470Q9BZP3 86 aa14.9□□□□□ -0.02
EXOSC3-203ENST00000465229 RPRD1BQ9NQG5 326 aaKnown RBP14.9□□□□□ -0.02
EXOSC3-203ENST00000465229 PRSS50Q9UI38 385 aa14.9□□□□□ -0.02
EXOSC3-203ENST00000465229 OR6C65A6NJZ3 312 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 DCTN6O00399 190 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 CASKO14936 926 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 QDPRP09417 244 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 CENPAP49450 140 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 GBX2P52951 348 aaPredicted RBP14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 ADORA2A-AS1P86434 159 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 MXD1Q05195 221 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 C4orf17Q53FE4 359 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 LINGO2Q7L985 606 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 SSX6Q7RTT6 188 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 SLC16A9Q7RTY1 509 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 OR6V1Q8N148 313 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 GPR137CQ8N3F9 429 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 OR51L1Q8NGJ5 315 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 OR6K6Q8NGW6 343 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNRF4Q8WWF5 429 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 PPP1R14BQ96C90 147 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 CCDC120Q96HB5 630 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 TPK1Q9H3S4 243 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 RERGLQ9H628 205 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 SRA1Q9HD15 236 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 ST6GALNAC2Q9UJ37 374 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 PROCRQ9UNN8 238 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 CMAHPQ9Y471 501 aa14.89□□□□□ -0.03
EXOSC3-203ENST00000465229 E9PI62 339 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SLC16A7O60669 478 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SC5DO75845 299 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SERPINA3P01011 423 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 CLEC2LP0C7M8 214 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 OCM2P0CE71 109 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 OCMP0CE72 109 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 CD8BP10966 210 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 CTLA4P16410 223 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 BMP5P22003 454 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF133P52736 654 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ETFDHQ16134 617 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 TRIM16LQ309B1 348 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 FBXW9Q5XUX1 488 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 RPL22L1Q6P5R6 122 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SLC25A47Q6Q0C1 308 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 PAMR1Q6UXH9 720 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 KCTD20Q7Z5Y7 419 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF610Q8N9Z0 462 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF837Q96EG3 531 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 PGLYRP3Q96LB9 341 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ALKBH3Q96Q83 286 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 DCLRE1CQ96SD1 692 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ULBP2Q9BZM5 246 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 OPN3Q9H1Y3 402 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 MARCH7Q9H992 704 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 DAPK2Q9UIK4 370 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SELENOFO60613 162 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 KRT33AO76009 404 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 PYCR1P32322 319 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 NAA10P41227 235 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 TGM4P49221 684 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 BLVRAP53004 296 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 MRPL28Q13084 256 aaKnown RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 CDK5R1Q15078 307 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 DDI2Q5TDH0 399 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ARL9Q6T311 187 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 PLEKHG7Q6ZR37 379 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 LYSMD2Q8IV50 215 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 TIGD4Q8IY51 512 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 UBE2J2Q8N2K1 259 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 RPS4Y2Q8TD47 263 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SNX33Q8WV41 574 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SMIM19Q96E16 107 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 PELI1Q96FA3 418 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 CRLF2Q9HC73 371 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 GPR35Q9HC97 309 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 UPB1Q9UBR1 384 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 MALT1Q9UDY8 824 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 ERRFI1Q9UJM3 462 aaPredicted RBP14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 B9D1Q9UPM9 204 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 FKBP7Q9Y680 259 aa14.88□□□□□ -0.03
EXOSC3-203ENST00000465229 SPTBN1Q01082 2364 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 IGLV1-36A0A0B4J1U3 117 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 DVL2O14641 736 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 DHHO43323 396 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 GPRIN2O60269 458 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 CNOT4O95628 575 aaKnown RBP14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 NR2C1P13056 603 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 CRABP1P29762 137 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 FOXG1P55316 489 aaPredicted RBP14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 FAPQ12884 760 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 C10orf128Q5T292 105 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF684Q5T5D7 378 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 TPRA1Q86W33 373 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 ABHD4Q8TB40 342 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 NSMAFQ92636 917 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 PIGMQ9H3S5 423 aa14.87□□□□□ -0.03
EXOSC3-203ENST00000465229 B3GAT2Q9NPZ5 323 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms