RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ZNF100Q8IYN0 542 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 LRRC18Q8N456 261 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 OR14A2Q96R54 314 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 DDX28Q9NUL7 540 aaKnown RBP21.48■■□□□ 1.03
U2AF1-204ENST00000459639 LUZP4Q9P127 313 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 EMC9Q9Y3B6 208 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 ARPC4-TTLL3A0A0A6YYG9 625 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 TRBV5-5A0A0J9YX44 114 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 SHISA3A0PJX4 238 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 ZNF879B4DU55 563 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 UCHL1P09936 223 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 CLEC2LP0C7M8 214 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 GRB2P62993 217 aaKnown RBP21.47■■□□□ 1.03
U2AF1-204ENST00000459639 FAM27D1Q5T7N8 215 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 OR5M9Q8NGP3 310 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 BARHL1Q9BZE3 327 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 PPIL3Q9H2H8 161 aaKnown RBP21.47■■□□□ 1.03
U2AF1-204ENST00000459639 TPK1Q9H3S4 243 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 UPB1Q9UBR1 384 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 TUBD1Q9UJT1 453 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 GTF2A1LQ9UNN4 478 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 TMEM269A0A1B0GVZ9 245 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 C1QTNF9BB2RNN3 333 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 IGHV3-9P01782 118 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 C1QTNF9P0C862 333 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 B4GALT1P15291 398 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 MAPK3P27361 379 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-204ENST00000459639 HSD11B1P28845 292 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 PSMA6P60900 246 aaKnown RBP21.47■■□□□ 1.03
U2AF1-204ENST00000459639 HNRNPA0Q13151 305 aaKnown RBP21.47■■□□□ 1.03
U2AF1-204ENST00000459639 TAF13Q15543 124 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 MOGQ16653 247 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 Q499Y3 187 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 ACSF3Q4G176 576 aaPredicted RBP21.47■■□□□ 1.03
U2AF1-204ENST00000459639 KRTCAP3Q53RY4 240 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 TPRA1Q86W33 373 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 SLC22A24Q8N4F4 322 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 OR6Q1Q8NGQ2 317 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 ZFAND2BQ8WV99 257 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 THRSPQ92748 146 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 WNT2BQ93097 391 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 FBXO17Q96EF6 278 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 MOB1AQ9H8S9 216 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 G6PC2Q9NQR9 355 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 FAM206AQ9NX38 181 aa21.47■■□□□ 1.03
U2AF1-204ENST00000459639 FREM1Q5H8C1 2179 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 A0A075B6Q4 140 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 TAF4O00268 1085 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 PLA2G5P39877 138 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 SF3B4Q15427 424 aaKnown RBP eCLIP21.46■■□□□ 1.03
U2AF1-204ENST00000459639 ABHD12BQ7Z5M8 362 aaPredicted RBP21.46■■□□□ 1.03
U2AF1-204ENST00000459639 FGD2Q7Z6J4 655 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 GPR148Q8TDV2 347 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 WACQ9BTA9 647 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 OR52A1Q9UKL2 312 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 SLC22A13Q9Y226 551 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 CACNA1GO43497 2377 aa21.46■■□□□ 1.03
U2AF1-204ENST00000459639 TRAV1-2A0A0B4J238 106 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 ZNHIT1O43257 154 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 CTSSP25774 331 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF324BQ6AW86 544 aaPredicted RBP21.45■■□□□ 1.02
U2AF1-204ENST00000459639 UNQ6494/PRO21346Q6UXR6 183 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF627Q7L945 461 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 SYT9Q86SS6 491 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 DERL3Q96Q80 235 aa21.45■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF71Q9NQZ8 489 aaPredicted RBP21.45■■□□□ 1.02
U2AF1-204ENST00000459639 IQCMA0A1B0GVH7 501 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 FARS2O95363 451 aaKnown RBP21.44■■□□□ 1.02
U2AF1-204ENST00000459639 OR3A2P47893 321 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 SCRN3Q0VDG4 424 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 GUSBP1Q15486 140 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 LINC00303Q3SY05 128 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 CCDC92Q53HC0 331 aaPredicted RBP21.44■■□□□ 1.02
U2AF1-204ENST00000459639 ELFN2Q5R3F8 820 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 BCL2L15Q5TBC7 163 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF813Q6ZN06 617 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 Q8NA96 180 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 ATF6BQ99941 703 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 SH3GL3Q99963 347 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 C6orf62Q9GZU0 229 aaPredicted RBP21.44■■□□□ 1.02
U2AF1-204ENST00000459639 MALT1Q9UDY8 824 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 DOCK7Q96N67 2140 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 INHBBP09529 407 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 FAM87AP0C7U9 286 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 OCM2P0CE71 109 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 PCBD1P61457 104 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 RAB35Q15286 201 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 HSD17B12Q53GQ0 312 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 NSUN5P2Q63ZY6 315 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 OR2A2Q6IF42 318 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF704Q6ZNC4 412 aaPredicted RBP21.44■■□□□ 1.02
U2AF1-204ENST00000459639 UBE2J2Q8N2K1 259 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 KCNJ15Q99712 375 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 C12orf49Q9H741 205 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 NOX4Q9NPH5 578 aa21.44■■□□□ 1.02
U2AF1-204ENST00000459639 CRNNQ9UBG3 495 aaPredicted RBP21.44■■□□□ 1.02
U2AF1-204ENST00000459639 ACOD1A6NK06 481 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 ISG15P05161 165 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 UBCP0CG48 685 aaKnown RBP21.43■■□□□ 1.02
U2AF1-204ENST00000459639 ARF1P84077 181 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms