RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 NAGAP17050 411 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 FUT1P19526 365 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 SLC6A12P48065 614 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 GSK3AP49840 483 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 SNRPNP63162 240 aaKnown RBP8.45□□□□□ -1.06
SMC6-207ENST00000448223 TSPAN31Q12999 210 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 C11orf87Q6NUJ2 197 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 TMPPEQ6ZT21 453 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 ZNF485Q8NCK3 441 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 NEIL2Q969S2 332 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 FAM3DQ96BQ1 224 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 C19orf43Q9BQ61 176 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 PRR14Q9BWN1 585 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 CDCA4Q9BXL8 241 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 DLL4Q9NR61 685 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 NSG2Q9Y328 171 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 WSB1Q9Y6I7 421 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 TMEM129A0AVI4 362 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 B4GALT2O60909 372 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 PTP4A3O75365 173 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 C8AP07357 584 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 RNF224P0DH78 156 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 NDUFS1P28331 727 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 DUSP1P28562 367 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 S100A7P31151 101 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 GALR1P47211 349 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 ZFP36L2P47974 494 aaKnown RBP8.45□□□□□ -1.06
SMC6-207ENST00000448223 AMTP48728 403 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 KCNJ10P78508 379 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 AWAT1Q58HT5 328 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 CST9Q5W186 159 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 C17orf99Q6UX52 265 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 GPR137CQ8N3F9 429 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 OR2AE1Q8NHA4 323 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 IL1F10Q8WWZ1 152 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 SEC11CQ9BY50 192 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 PDFQ9HBH1 243 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 ALKBH4Q9NXW9 302 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 PRODH2Q9UF12 536 aa8.45□□□□□ -1.06
SMC6-207ENST00000448223 A0A0G2JMZ2 1700 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 TRBV4-1A0A0J9YWV2 114 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 LOC100289279A0A1B0GTE1 492 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 ZNF593O00488 134 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 OR2T7P0C7T2 308 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 SRMP19623 302 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 OR3A1P47881 315 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 CDC34P49427 236 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 ERVFRD-1P60508 538 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 IFITM3Q01628 133 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 LY6G5CQ5SRR4 150 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 AADACL3Q5VUY0 350 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 NXPE4Q6UWF7 544 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 LRRC25Q8N386 305 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 OR4A4PQ8NGN8 299 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 OR2T27Q8NH04 317 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 F2RL3Q96RI0 385 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 AKIRIN1Q9H9L7 192 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 ZMAT3Q9HA38 289 aaKnown RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 HCFC1R1Q9NWW0 138 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 WASHC3Q9Y3C0 194 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 MFSD2BA6NFX1 497 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 TBXA2RP21731 343 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 AOAHP28039 575 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 SUCLG1P53597 346 aaKnown RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 TMEM115Q12893 351 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 ELOCQ15369 112 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 TRILQ7L0X0 811 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 TMEFF2Q9UIK5 374 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 GPR160Q9UJ42 338 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 Q9Y3F1 56 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 PLXNA1Q9UIW2 1896 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 BRWD1Q9NSI6 2320 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 NUDT21O43809 227 aaKnown RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 MPC1LP0DKB6 136 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 ZNF43P17038 809 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 SDHBP21912 280 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 SNRPGP62308 76 aaKnown RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 DMRTA1Q5VZB9 504 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 RPL7L1Q6DKI1 246 aaKnown RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 TMEM65Q6PI78 240 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 COMMD6Q7Z4G1 85 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 KCNG3Q8TAE7 436 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 CDH20Q9HBT6 801 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 SLC35A3Q9Y2D2 325 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 OPN1MWP04001 364 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 OPN1MW2P0DN77 364 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 OPN1MW3P0DN78 364 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 ACP5P13686 325 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 DAOP14920 347 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 SOX18P35713 384 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 NHLH1Q02575 133 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 GPR18Q14330 331 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 HIST3H3Q16695 136 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 YOD1Q5VVQ6 348 aaPredicted RBP8.44□□□□□ -1.06
SMC6-207ENST00000448223 HSD11B1LQ7Z5J1 315 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 ZNF100Q8IYN0 542 aa8.44□□□□□ -1.06
SMC6-207ENST00000448223 ATG101Q9BSB4 218 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms