RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TMEM123Q8N131 208 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 CPNE4Q96A23 557 aaPredicted RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 AGAP4Q96P64 663 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 NEDD4LQ96PU5 975 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 UCN2Q96RP3 112 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 ABHD1Q96SE0 405 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 PRRX2Q99811 253 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 C7orf50Q9BRJ6 194 aaKnown RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 SRXN1Q9BYN0 137 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 EMC7Q9NPA0 242 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 IL17BQ9UHF5 180 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 CLEC4AQ9UMR7 237 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 IGHV3-15A0A0B4J1V0 119 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 BOLA2-SMG1P6H3BVE0 249 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 RFPL3SP0C7P2 107 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 MNDAP41218 407 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 CAPZA1P52907 286 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 RRADP55042 308 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 OR1C1Q15619 314 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 WIPI1Q5MNZ9 446 aaPredicted RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 SPINK14Q6IE38 97 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 UBQLNLQ8IYU4 475 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 ELMOD2Q8IZ81 293 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 NKAIN3Q8N8D7 197 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 HAVCR1Q96D42 359 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 RNF121Q9H920 327 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 OR5V1Q9UGF6 321 aa13.9□□□□□ -0.18
SNX13-204ENST00000444712 NUFIP1Q9UHK0 495 aaKnown RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 KLF13Q9Y2Y9 288 aaPredicted RBP13.9□□□□□ -0.18
SNX13-204ENST00000444712 SLC17A2O00624 439 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 EEF1E1O43324 174 aaKnown RBP13.89□□□□□ -0.19
SNX13-204ENST00000444712 WDPCPO95876 746 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 HPNP05981 417 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 IGFBP3P17936 291 aaPredicted RBP13.89□□□□□ -0.19
SNX13-204ENST00000444712 GFRA1P56159 465 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 CLDN20P56880 219 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 ABLIM2Q6H8Q1 611 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 CFAP77Q6ZQR2 320 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 SYNPRQ8TBG9 265 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 HPS1Q92902 700 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 SLC25A38Q96DW6 304 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 ADGRG7Q96K78 797 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 ZNF385AQ96PM9 386 aaKnown RBP13.89□□□□□ -0.19
SNX13-204ENST00000444712 ULBP2Q9BZM5 246 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 PBOV1Q9GZY1 135 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 ZNF703Q9H7S9 590 aaPredicted RBP13.89□□□□□ -0.19
SNX13-204ENST00000444712 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
SNX13-204ENST00000444712 FOXD3Q9UJU5 478 aaPredicted RBP13.89□□□□□ -0.19
SNX13-204ENST00000444712 CDRT15L2A8MXV6 281 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 DHHO43323 396 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 CDAP32320 146 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 KIR2DL3P43628 341 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 MFAP5Q13361 173 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 RAB11BQ15907 218 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 LUZP2Q86TE4 346 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 DTX1Q86Y01 620 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 C20orf196Q8IYI0 205 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 TOMM5Q8N4H5 51 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 GJC3Q8NFK1 279 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 OR10S1Q8NGN2 331 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 SMIM4Q8WVI0 70 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 FOXRED1Q96CU9 486 aaPredicted RBP13.88□□□□□ -0.19
SNX13-204ENST00000444712 SIGLEC12Q96PQ1 595 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 SLC17A5Q9NRA2 495 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 MRPS7Q9Y2R9 242 aaKnown RBP13.88□□□□□ -0.19
SNX13-204ENST00000444712 PINLYPA6NC86 204 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 TRAPPC2P0DI81 140 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 TRAPPC2BP0DI82 140 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 SGCAQ16586 387 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 OR10D3Q8NH80 312 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 PPP1R14AQ96A00 147 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 ZFP3Q96NJ6 502 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 FLVCR1Q9Y5Y0 555 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 CACNG2Q9Y698 323 aa13.88□□□□□ -0.19
SNX13-204ENST00000444712 SPEGQ15772 3267 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 A0A1B0GVC2 190 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 A0A1B0GVI7 797 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 A6NIN4 97 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 CXCL13O43927 109 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 APOC1P02654 83 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 TTRP02766 147 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 ACSM4P0C7M7 580 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 CLDN12P56749 244 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 TMEM69Q5SWH9 247 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 IGF2-ASQ6U949 168 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 ZIC4Q8N9L1 334 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 DNAAF1Q8NEP3 725 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 YIPF5Q969M3 257 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 MMP28Q9H239 520 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 ZNF275Q9NSD4 429 aaPredicted RBP13.87□□□□□ -0.19
SNX13-204ENST00000444712 DDX28Q9NUL7 540 aaKnown RBP13.87□□□□□ -0.19
SNX13-204ENST00000444712 PAQR5Q9NXK6 330 aaPredicted RBP13.87□□□□□ -0.19
SNX13-204ENST00000444712 MUC3AQ02505 3323 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 VPS13AQ96RL7 3174 aa13.87□□□□□ -0.19
SNX13-204ENST00000444712 MEIOCA2RUB1 952 aa13.86□□□□□ -0.19
SNX13-204ENST00000444712 KLRC4-KLRK1H3BQV0 150 aa13.86□□□□□ -0.19
SNX13-204ENST00000444712 H3BSH0 61 aa13.86□□□□□ -0.19
SNX13-204ENST00000444712 GABARAPH6UMI1 98 aa13.86□□□□□ -0.19
SNX13-204ENST00000444712 P2RY10O00398 339 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms